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Query: HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;, from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTPYKVSHQLKKLNNSSSLTKKNMTMEENTVHPARKLLLGQLIAYLLQAVAVVVGFESDLLEVGACAEDVFVKYQMLMLMEVLTICFIPMALKMFSLSAVRRRLKADRVRGLVLFGSCRLAMIGVPLVANTILYYMSMSVAYGYMAIIGGLCFTFVYPSIGRCINETNIGELast
1 -107.000HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;  ali  100  1MTPYKVSHQLKKLNNSSSLTKKNMTMEENTVHPARKLLLGQLIAYLLQAVAVVVGFESDLLEVGACAEDVFVKYQMLMLMEVLTICFIPMALKMFSLSAVRRRLKADRVRGLVLFGSCRLAMIGVPLVANTILYYMSMSVAYGYMAIIGGLCFTFVYPSIGRCINETNIGE 171
2 -5.170PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;  ali follow..  12  2......................NEGIPEQLIRRLSDASR--LVPLALLAVVAAVIYVWRPLFHGLI-----YRVAYSPSLLILVGTTVVAGIALVFWPRMGEDPLESAVTKWSILGTIVVAALVLSVAYSIPA...................................... 105
3 -4.960PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8]  ali follow..  9  3ETQFKVQQRLEAVTAQVADVEQSLEKTKAAAEKQKKKLEALQKETKAARATALTVQDIEAMGKKATFGN-NITLTPDECRTLKDYAVSSFAEK.............................................................................. 97
4 -4.910PB004588 Q64QH1_BACFR/1-389 PB004588; Pfam-B_4588;  ali follow..  14  3...............TTNAVNEKISYTINMDTQKKHNLSGTIILVSCFLLLAGACDNSDRIETETQANGVLLNFNAST............................................................................................. 65
5 -4.290PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104;  ali follow..  13  1MHNFKEKIQFSKIRSRSCP------MQQNKFRKAIVAILMPMILVVSFGAIVKKVYEVNDGFNIGSGLLAKFIKTLVMYFPFSILYFVGFFFDLILFNLIE...................................................................... 102
6 -3.990PB019388 gi|83589066|ref|YP_429075.1| Radical SAM [Moorella thermoacetica ATCC 39073]gi|83571980|gb|ABC18532.1| Radical SAM [Moorella thermoacetica ATCC 39073]  ali follow..  20  13.PPYQVYEEMLRLHAIEGLLKYNSHLADHAFAYLAA....................................................................................................................................... 56
7 -3.720PB006933 gi|1881301|dbj|BAA19328.1| SIMILAR TO ORF13 OF ENTEROCOCCUS FAECALIS TRANSPOSON TN916. [Bacillus subtilis]  ali follow..  7  1....KEESFFRSAFQKLKRIERPEKDKQKVPRDRSKLIAVTLWSCVGSLLFICLL.................................................................................................................... 51
8 -3.410PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;  ali follow..  16  32ATSKPPSGNLPK--RKQPTIKNEFINEKRKMRMNLPKVKMLQVSKCLIGLAVMMLQSCD................................................................................................................ 92
9 -3.160HGC00429 gi|162734516|dbj|BAAZ01029480.1|1.0 TMP00411;  ali follow..  8  201VTPDQLAVRVRSIERQEAARAHKEAKRQPPIAEQLK....................................................................................................................................... 236
10 -2.930PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;  ali follow..  17  96MNPKRMQRVLNKSKKQSAVSTKAQAEMQKLHEALKKEKK.................................................................................................................................... 134
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.