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Query: HGC00787 gi|162657578|dbj|BAAX01002027.1|2.0 TMP01033;, from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEQTSPIQALLQQRTLLQIEYYTEKEAFRKQTEQMGMQRKVKRGDAWFPLRIGKSFYNSLNQNAIEVFRTEDQDIEHNFEFGRPVMFFKAGETKTAQTDGKTEKKMLKYFSFTGTVSYVDGDRMVITVPDSAPLLELQQADVPVGVQLSFDETSYKMMFDALDRTMKAKNNRLAYLRDLFYSHRKAERYSFEPMRFPWLast
1 -89.400HGC00787 gi|162657578|dbj|BAAX01002027.1|2.0 TMP01033;  ali  100  1MEQTSPIQALLQQRTLLQIEYYTEKEAFRKQTEQMGMQRKVKRGDAWFPLRIGKSFYNSLNQNAIEVFRTEDQDIEHNFEFGRPVMFFKAGETKTAQTDGKTEKKMLKYFSFTGTVSYVDGDRMVITVPDSAPLLELQQADVPVGVQLSFDETSYKMMFDALDRTMKAKNNRLAYLRDLFYSHRKAERYSFEPMRFPW 198
2 -5.200PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;  ali follow..  1MKIERLFIYCLLAGTSLLASCNSEDMTDNP-------VETLSEGMYPLTFTAMQGEVVATPQTRVSDYDDTDGKHKSKWDGGEVIGVKIGTDGAVGSYTLDSDGKPTTSTS-NIPAYWQSTASQTV--------------------------YGWYPNTADIS--LTGQDNTGNKFPYVLKGVSSKQYSYKENVQLNL 162
3 -3.670PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276;  ali follow..  1MSNIE-QAYRGYGFAGRGQKNGCTVYQLKGEGGSGEMVCYDAPGIQMSFNQLTMDSTFQSVKKFLQIDYCIEGCYEVEYQNGTVSFLGEGDLCVTDLSRQVFVSSRLPLRKYRGVTLFLEVEKAQHTLSAGFPQAEINLAGIVNELCLVKSREDVERIFGKLSEVDERIQAPYYWIKTMEL................. 190
4 -3.240PB012823 Q5LCS8_BACFN/1-272 PB012823; Pfam-B_12823;  ali follow..  11  16...................................................................................LTVLFVACNNGKGQQPSEENEDPKAKEILQGIWLDDETETPLMRIIG----------DTIYYSDAQSAPVYFKILKDTL.................................... 84
5 -2.890PB009534 gi|153852721|ref|ZP_01994158.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]gi|149754363|gb|EDM64294.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]  ali follow..  77...................................................................................................................VENIGETDFIVTYEEQDGKGGVIH-GAAFSTMAFNNDVGVTKMFGQIYELLTGTKSNGFTILEFMYC................ 155
6 -2.840PB128892 A6TNK2_9CLOT/1-174 PB128892; Pfam-B_128892;  ali follow..  1MFFNTSEQLAENKLVLLYI-----FDRVQFPLANIQLTQFIMENDIMNYFMLQQFIGELKESSFIMEQEKDTGQLFMITDQGKKTLIPEEKRLKIDHLLNIKKEEFVRNTEIKGEYEKLTDNEYLVKLSVIEQGTPI--------FNLKLSVGNVKQAKDMCEKWRSDAQELYGQIINLLI................. 174
7 -2.660PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;  ali follow..  11  10.......................................................................................................................GTRSMEISEENLVTIEKYSLFQHLIDSNGIVDEAVLEKLKLNIRSLIASQEEDSKDLLDLCID................ 72
8 -2.620PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete)  ali follow..  1MKAIRHFITITHHKILVMFRIGLYKQGLLHDMSKYSPTEFLVGCRYYKGYMSPNNAERADRGYSSAWLHHKGRNKHH----------YWIDYAVSKPGDDKTHTKMEGMKMPIRYVCEMFIDRVSASKNYQKEKYTDKSALEYYEKSVMIHPDTKAMLEYLLVMLVKGEEYTYSYIKKEVLKGHIP............ 185
9 -2.510PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;  ali follow..  130......EKYYNEFSKILSQKQIMKIYQQEKSNMNKFRKEFDRR........................................................................................................................................................... 166
10 -2.090PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;  ali follow..  311IMPKNLVIAHDNAVKLLYQMKHEVEEQQYKVRFEKQASDLLTEGKALSHC--------------------GGSNYIKQHIEGKTTIIFVRDKQDLEKSL---------------YTLEYKNGQIY-------------------QLRGKHNCDPTKDVQMAANKWAKLLKSKTKVLQN.................... 452

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 3 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Erlandsen H, Godzik A. HEPN: a common domain in bacterial drug resistance and human neurodegenerative proteins. Trends Biochem Sci. 2003 May;28(5):224-6. Review.