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Query: HGC00789 gi|163310627|dbj|BABD01000073.1|7.0 TMP01036;, from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .
# Score Template Links and tools%idFirst MAVSAPPILKTLKTKDMIAKTILQQIGGKRFTAMTGSRDFIDMGNGLRMSLARNKTSANRLDIIYDEGADLYNMRFYRRTFSKKTFECKTKDIAVHEGIYFDMLEEMFTMVTGLYTRFLast
1 -85.500HGC00789 gi|163310627|dbj|BABD01000073.1|7.0 TMP01036;  ali  100  1MAVSAPPILKTLKTKDMIAKTILQQIGGKRFTAMTGSRDFIDMGNGLRMSLARNKTSANRLDIIYDEGADLYNMRFYRRTFSKKTFECKTKDIAVHEGIYFDMLEEMFTMVTGLYTRF 118
2 -4.590PB039305 _Gut.Meta.Jp.0057508_ gi|162726131|dbj|BAAY01002830.1||2 (- 1092:1581~0 complete)  ali follow..  7  13.TTTNKMTMTVMESSVRFSKGVTEALGCPAYVKLL-------------------NDKQKKIAVQACDAXDENAIKFCKTKRSKAGVDSDAAGKASSVTVRTTDVLVAVQKYFTF.... 108
3 -3.980PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152  ali follow..  4  5ISISGRPGLFEVHTQTR-TGVVATSLVDGKRINANARNQVSLLSE-INIYGLEKEVPLQEVLTMIHTKEEGKQCSVKPKSPADELEAYFFDVFQDYDEVYPSDIKKIIQ......... 113
4 -3.270HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;  ali follow..  7  5YKRQRMNIFDIAKQNQEKAWQVIKNTNIIQIWEDAGAKINLVGSLRTGLLMK.................................................................. 56
5 -3.220PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946;  ali follow..  7  239..................IDEYYNE--GKTQGICVFGSGYYKKADTLILSARIGDEIIETVEVDLRTL------EVVQCHGKHNQDTEYHERIIDLVNKNANLIRERMKA........ 322
6 -2.840PB001404 Q2S5L8_SALRD/1-256 PB001404; Pfam-B_1404;  ali follow..  8  166.......................NRLAATRIMRVLTFQRLTDVYGDVPYFDAGKGALEGEFTPHYTRQDSIYMDLHDELRAAVDQFDASQPTFGGADLFFNGSIEQWKRFANSL.... 256
7 -2.590PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]  ali follow..  14  171...QMPPNRMFLISGNNTGTGILQNIMDSD-------GTGLICEAEADTLSTAIGSDHGHWSDTLRKAFDHDRLSYNRRTDQEYREVKK-SYLSVLISGTPSQVQTFIPTADGSYSRQ 278
8 -2.580PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;  ali follow..  11  87..........PHHAVQSLKHRLLTYFGKTTYYRIYRKERYITIQEQDYIRDSFVRAGFSSDLIRYDAMVYMYE............................................. 149
9 -2.570PB021443 Q5LG43_BACFN/1-226 PB021443; Pfam-B_21443;  ali follow..  10  72.......STHDNKVREEMAKDIRSLVQSSKYELLMKQKS---TVSGSEVYVNRKGSKVKELIMVMNGASSLKFVYME--------------------DMTTDDIKKLMLYQS...... 154
10 -2.180PB009510 _JGI.0345302_ 2004041369 [Human Gut Community Subject 8]  ali follow..  4  3LSYVTPGFYDKSYVGKWMFQVMGLEYDKAL-----------------LAEELPEQFFPETATWGLCWHEIKWGLPVQENLSYQERRQAIYEKRDYHSPMTPYIMERYLENATGFTVHI 104
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 3 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Erlandsen H, Godzik A. HEPN: a common domain in bacterial drug resistance and human neurodegenerative proteins. Trends Biochem Sci. 2003 May;28(5):224-6. Review.