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current user: public |
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Query: HGC00803 gi|163280588|dbj|BABD01030100.1|2.0 TMP01051;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . | |||||||
# | Score | Template | Links and tools | %id | First | LNEKGAIPMKAFDPNYKLLDEMYQDDYYPAFLVDKVKDELQKVIDLLESGETDTEVIQETLDEAVCGINDLQEEFDENDSEIETVARDCIGVTVAYILEWFGIPIDIEEAIRERDW | Last |
1 | -68.800 | HGC00803 gi|163280588|dbj|BABD01030100.1|2.0 TMP01051; | ali | 100 | 1 | LNEKGAIPMKAFDPNYKLLDEMYQDDYYPAFLVDKVKDELQKVIDLLESGETDTEVIQETLDEAVCGINDLQEEFDENDSEIETVARDCIGVTVAYILEWFGIPIDIEEAIRERDW | 116 |
2 | -4.040 | PB019278 gi|154508461|ref|ZP_02044103.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982]gi|153798095|gb|EDN80515.1| hypothetical protein ACTODO_00960 [Actinomyces odontolyticus ATCC 17982] | ali follow.. | 14 | 1 | ................................MDTIDNFLDAMFAPYPASTRLTDAKVELRAMMEDAYADAIASGMTHNEAVGRVITD--FGNLQEIAPVLGIADDLTA....... | 75 |
3 | -4.030 | PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete) | ali follow.. | 8 | 33 | .................................WDGTINKAKLTKYLQLSSQQNEQVASICDYFQEQMKVANSSKKNSDQKVRNAVYGN--------------LKLMKNTLTEKQY | 101 |
4 | -3.880 | PB012771 _Gut.Meta.Jp.0094636_ gi|162817068|dbj|BABA01027641.1||1 (+ 249:636~0 complete) | ali follow.. | 13 | 1 | MKTTTTNELPAEIMENGIHYTLVGDYYFPTCMLGDLQEKHPHEYVRLIWADELAALLESVQRECEEREAVLVREMAEAEGVNEEMKGN---EQMAWVQRMEMICGRVEEVVCEE.. | 125 |
5 | -3.880 | PB022697 Q5LAY4_BACFN/1-165 PB022697; Pfam-B_22697; | ali follow.. | 13 | 92 | ................................AEDFSKLVYKAKKIYDAHRHDLEDEFMAMYEQYEAFDDLEEEYLDIEEEVTALVASYVDDHLELFAK................. | 163 |
6 | -3.270 | PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8] | ali follow.. | 18 | 5 | .............................QFKVQAEQQRLEAVTAQVADVEQSLEKTKAAAEKQKKKLEALQKETKAARADIEAMGKKAT.......................... | 71 |
7 | -3.180 | HGC00962 gi|162759780|dbj|BAAZ01005693.1|3.0 TMP01305; | ali follow.. | 12 | 62 | CPIRNEFAEKALRQYCGRLHAERTGAYLPRALQGVLEGTLGVFGERLGR-------LLKLAVEHNMTNHLLGGDMDMTRDEYSKMRGSSVRE-----VSATHGTISFKDVMVFYK. | 165 |
8 | -2.850 | PB050904 Q64SA2_BACFR/1-230 PB050904; Pfam-B_50904; | ali follow.. | 12 | 41 | ....................................NELINGQIEKQIKGQTQTALLQNSIATEFNQIHKWEKQYNSYLKTASGYASSLCTHLYNDGVRIFLTLGKLGKAIQNN.. | 120 |
9 | -2.740 | PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740; | ali follow.. | 8 | 38 | ..EQMMQMQTNQMVRALMLDDATAAKFTPIYCRMMNFKPRARKDAAQGTEDAEIAKMLKDQFAQSRKMLDIREKYYNEFSKILSQKQ---------IMKIYQQEKSNMNKFRKE.. | 162 |
10 | -2.600 | HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636; | ali follow.. | 11 | 27 | ..........................................................AFAAGTGDVAGAVESTWSTASTQIKSVVDNVVFPAIDLILAVF............... | 69 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51. |