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Query: HGC00870 gi|163286116|dbj|BABD01024572.1|2.0 TMP01154;, from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLYTAEIKTHQEGKMKETILLFHAPDKDTLLKIEMALFPLHVRLRRVAKEDYVQPLGALAGVKDIPRIEETYEGDELSDTLFVFAFFSDNRLNQALAALRKSGAGTFPYKAILTPTNQNWNALQCFSEIRREHETIQKQLKGNKEQAEELast
1 -66.900HGC00870 gi|163286116|dbj|BABD01024572.1|2.0 TMP01154;  ali  100  1MLYTAEIKTHQEGKMKETILLFHAPDKDTLLKIEMALFPLHVRLRRVAKEDYVQPLGALAGVKDIPRIEETYEGDELSDTLFVFAFFSDNRLNQALAALRKSGAGTFPYKAILTPTNQNWNALQCFSEIRREHETIQKQLKGNKEQAEE 149
2 -3.920HGC00573 gi|163306732|dbj|BABD01003960.1|2.0 TMP00669;  ali follow..  12  12.......................................LEKAMFQATVADFWMAGLELGVIKTNQRDEASPKEVCSGIPQFIIG----KGLAGFLGRWKACGLLDDATLQC---KVVIFELPKVIEILRVSDKKNKFNVKSKKYNGKE 123
3 -3.780PB076697 gi|160881556|ref|YP_001560524.1| hypothetical protein Cphy_3432 [Clostridium phytofermentans ISDg]gi|160430222|gb|ABX43785.1| conserved hypothetical protein [Clostridium phytofermentans ISDg]  ali follow..  9  138..........................HKNFTVLDKYLKSVGTKLLYVQAPYKVNRDNNQLPY---------------------LKDYPNKNADKLLEGLNKLKIDYIDFREVFANTDHHWTYQYMLDYMEKNYEFQYNKQTYNGANYNQ 258
4 -2.960PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF  ali follow..  13  94............................................................................................................YTTYVNIFYHNWVVILLIATALEVYTLHRIDYLIEKE.... 130
5 -2.600PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520;  ali follow..  13  62ATDRVRGLTSRFKQLVSAEGQNEPLAREEKRLIIRQLPRLSRRTRFLMRALQAFYTSVAL---------------VLTSILLGLDGLFDVNTGSLPLLVALGGSVSLAYGALLLSYEARYSAATTKEEMRFLEELGQHYAELYADE... 193
6 -2.490PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;  ali follow..  8  99........................................................................................KRMQRVLNKSKKQSAVSTKAQAEMQKLHEALKKEKKSQSKEKRQALKQYKYQLKQEKRHQK 159
7 -2.310HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;  ali follow..  9  1................................................................................................................MTP----YKVSHQLKKLNNSSSLTKKNMTMEENTVHP 33
8 -2.300PB012386 gi|82541244|ref|XP_724876.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii str. 17XNL]gi|23479680|gb|EAA16441.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii]  ali follow..  12  2...............................................................................DIYIFNDSTNIPIGTVFSFVSKKAVQDISEDLIKIELNQNVSINKIFNILKASQASENTQNLRKKHAPIK 77
9 -2.190HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636;  ali follow..  19  5............................NYKRLIVMLVVVLAITCLMATTAFAAGTGDVAGAVESTWSTASTQIKSVVDNVVILAVFFFAKLGTAYFEYRKSGQFEWAAPAILTAPMYLWSIIGI........................ 115
10 -2.170PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;  ali follow..  11  169AMAYQQNGGRLDPFVEGLEALETLQDGDRVLISEACNNRITSACNDIGMVQIPNKLEAALGGKKLQIEPELESGGMDGLKLAIHCGIDAQKMQQRMKDLHEAGVPVTNYGVFFSWAAWPDALRRALEPWGVEPPVGTPATPAAAPAT.. 326
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 4 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;