current user: public |
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Query: HGC00870 gi|163286116|dbj|BABD01024572.1|2.0 TMP01154;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . | |||||||
# | Score | Template | Links and tools | %id | First | MLYTAEIKTHQEGKMKETILLFHAPDKDTLLKIEMALFPLHVRLRRVAKEDYVQPLGALAGVKDIPRIEETYEGDELSDTLFVFAFFSDNRLNQALAALRKSGAGTFPYKAILTPTNQNWNALQCFSEIRREHETIQKQLKGNKEQAEE | Last |
1 | -66.900 | HGC00870 gi|163286116|dbj|BABD01024572.1|2.0 TMP01154; | ali | 100 | 1 | MLYTAEIKTHQEGKMKETILLFHAPDKDTLLKIEMALFPLHVRLRRVAKEDYVQPLGALAGVKDIPRIEETYEGDELSDTLFVFAFFSDNRLNQALAALRKSGAGTFPYKAILTPTNQNWNALQCFSEIRREHETIQKQLKGNKEQAEE | 149 |
2 | -3.920 | HGC00573 gi|163306732|dbj|BABD01003960.1|2.0 TMP00669; | ali follow.. | 12 | 12 | .......................................LEKAMFQATVADFWMAGLELGVIKTNQRDEASPKEVCSGIPQFIIG----KGLAGFLGRWKACGLLDDATLQC---KVVIFELPKVIEILRVSDKKNKFNVKSKKYNGKE | 123 |
3 | -3.780 | PB076697 gi|160881556|ref|YP_001560524.1| hypothetical protein Cphy_3432 [Clostridium phytofermentans ISDg]gi|160430222|gb|ABX43785.1| conserved hypothetical protein [Clostridium phytofermentans ISDg] | ali follow.. | 9 | 138 | ..........................HKNFTVLDKYLKSVGTKLLYVQAPYKVNRDNNQLPY---------------------LKDYPNKNADKLLEGLNKLKIDYIDFREVFANTDHHWTYQYMLDYMEKNYEFQYNKQTYNGANYNQ | 258 |
4 | -2.960 | PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF | ali follow.. | 13 | 94 | ............................................................................................................YTTYVNIFYHNWVVILLIATALEVYTLHRIDYLIEKE.... | 130 |
5 | -2.600 | PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520; | ali follow.. | 13 | 62 | ATDRVRGLTSRFKQLVSAEGQNEPLAREEKRLIIRQLPRLSRRTRFLMRALQAFYTSVAL---------------VLTSILLGLDGLFDVNTGSLPLLVALGGSVSLAYGALLLSYEARYSAATTKEEMRFLEELGQHYAELYADE... | 193 |
6 | -2.490 | PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142; | ali follow.. | 8 | 99 | ........................................................................................KRMQRVLNKSKKQSAVSTKAQAEMQKLHEALKKEKKSQSKEKRQALKQYKYQLKQEKRHQK | 159 |
7 | -2.310 | HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997; | ali follow.. | 9 | 1 | ................................................................................................................MTP----YKVSHQLKKLNNSSSLTKKNMTMEENTVHP | 33 |
8 | -2.300 | PB012386 gi|82541244|ref|XP_724876.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii str. 17XNL]gi|23479680|gb|EAA16441.1| blood-stage membrane protein Ag-1 [Plasmodium yoelii yoelii] | ali follow.. | 12 | 2 | ...............................................................................DIYIFNDSTNIPIGTVFSFVSKKAVQDISEDLIKIELNQNVSINKIFNILKASQASENTQNLRKKHAPIK | 77 |
9 | -2.190 | HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636; | ali follow.. | 19 | 5 | ............................NYKRLIVMLVVVLAITCLMATTAFAAGTGDVAGAVESTWSTASTQIKSVVDNVVILAVFFFAKLGTAYFEYRKSGQFEWAAPAILTAPMYLWSIIGI........................ | 115 |
10 | -2.170 | PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934; | ali follow.. | 11 | 169 | AMAYQQNGGRLDPFVEGLEALETLQDGDRVLISEACNNRITSACNDIGMVQIPNKLEAALGGKKLQIEPELESGGMDGLKLAIHCGIDAQKMQQRMKDLHEAGVPVTNYGVFFSWAAWPDALRRALEPWGVEPPVGTPATPAAAPAT.. | 326 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Lukasz Jaroszewski, Zhanwen Li, S. Sri Krishna, Constantina Bakolitsa, John Wooley, Ashley M. Deacon, Ian A. Wilson, Adam Godzik, Exploration of Uncharted Regions of the Protein Universe. Plos Biology. 2009 Sep. 7(9):e1000205 |