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Query: HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167;, from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100
# Score Template Links and tools%idFirst MANYATNIFHARTENKTDLDKIEDFLDDTFSEFTNRYGDSVDAEFSSRWVYPEEEIKKLVESLEDKDKVYIKILTYEFEDEYVSFRIFSQGEWKVKLVTELast
1 -79.900HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167;  ali  100  1MANYATNIFHARTENKTDLDKIEDFLDDTFSEFTNRYGDSVDAEFSSRWVYPEEEIKKLVESLEDKDKVYIKILTYEFEDEYVSFRIFSQGEWKVKLVTE 100
2 -4.990PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;  ali follow..  12  200ISEACNHNRITSACNDIGMVQIPNKLEAALG------GKKLQIEHAFGREFPELE-QKMQQRMKDLHEAGVPVTNYGVFFSWAAWP.............. 298
3 -4.270HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  12  20....CDHNETYADQRDRELDSINAFLRNENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNLFESNGIYMQVIN......................... 94
4 -3.950HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636;  ali follow..  19  32.....................................TGDVAGAVESTWSTASTQIKSVVDNV---DLILAVFFFAKLGTAYFEYRKSGQFEWAAPAI.. 94
5 -3.060PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276;  ali follow..  34  165....................................................ERIFGKLSEVDERIQAPYYWIKTMEL...................... 190
6 -2.950HGC00965 gi|163282470|dbj|BABD01028218.1|2.0 TMP01310;  ali follow..  13  89..............TEEGRTAVAQYLNDAYNAEPERWSAHPSILDCEPWTPPAPEPDA.......................................... 132
7 -2.850PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete)  ali follow..  14  330...........GKAMNDHLTKIQKYIAEIWNDHRRLGLPFFWDFYPQRMRYPTTLYQKAVELLGGSDVIITPL-------------------W....... 436
8 -2.770PB021133 Q64YN4_BACFR/1-310 PB021133; Pfam-B_21133;  ali follow..  21  41......DSFFNLTENNIYKSKVIKDIDSNIGQLLKT-----DAKFYAIHVSPEKELQAMGNTEHEQAESMKRYIREVFIPEYAK................ 114
9 -2.430PB036876 Q56VH6_BACFR/1-141 PB036876; Pfam-B_36876;  ali follow..  11  4..............TDHFKRTIQMYLEQRAAEDALFAKNYRNPAIDDCVTYILNYVQKSGCNGFTDGEIYGQAVHY........................ 67
10 -2.310PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;  ali follow..  10  96..................................................FDLKHMDKLTDLVNSGSFSADSKIKLSADNKFAAVQLFQFVPYTYQPVTA 157
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 3 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Erlandsen H, Godzik A. HEPN: a common domain in bacterial drug resistance and human neurodegenerative proteins. Trends Biochem Sci. 2003 May;28(5):224-6. Review.