current user: public |
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Query: HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . | |||||||
# | Score | Template | Links and tools | %id | First | MSKKKRGEERMKEEDNILKKVGKKNSFKVPEGYFENLTSEVMGKLPEKEGPAFEEVKQPMMWIRMKPLLYMAAMFIGAALIIRVASSNHQPTTAGDHLTANEAATEVVSDEYIDVALDRSMLDDYSLSVYLSDATAE | Last |
1 | -63.600 | HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234; | ali | 100 | 1 | MSKKKRGEERMKEEDNILKKVGKKNSFKVPEGYFENLTSEVMGKLPEKEGPAFEEVKQPMMWIRMKPLLYMAAMFIGAALIIRVASSNHQPTTAGDHLTANEAATEVVSDEYIDVALDRSMLDDYSLSVYLSDATAE | 137 |
2 | -7.170 | HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709; | ali follow.. | 19 | 1 | MDMTDNNDDVL------VKKFFSENRIDVPDDGF---SRRVMRRLPDRTR----------RISRLWTAVCVVIGLLIFFRN........................................................ | 62 |
3 | -6.790 | PB030138 Q7MX14_PORGI/1-113 PB030138; Pfam-B_30138; | ali follow.. | 18 | 8 | ...................KQRKPRSFDHKPIYYDQRRDELEKRIERIRRE...................................................................................... | 39 |
4 | -4.190 | PB032818 Q5LA03_BACFN/1-211 PB032818; Pfam-B_32818; | ali follow.. | 9 | 64 | QGGKLGLAEKSASRKMLMQD------YGISESFFKEIDTSIKKNCRTQN........................................................................................ | 106 |
5 | -4.000 | PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7] | ali follow.. | 17 | 4 | ..........................ISVPRD-LTKVKSKVMFNLTKRQ------------------LICFGMAVLIGVPSFFLM.................................................... | 43 |
6 | -3.550 | PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890; | ali follow.. | 13 | 19 | ..........................FACPIIFASIMKKEFIGRTAKS---------------LSLALAIFSGCIFGSVLPAWSQEIVAGELERCFLAMPESVLPIVTMEERNDLCRRAGHLSGFTHTASLES.... | 110 |
7 | -3.500 | HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304; | ali follow.. | 21 | 5 | ..............................VHYFDELLERI-RDIRASEK....................................................................................... | 23 |
8 | -3.360 | HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455; | ali follow.. | 8 | 21 | .DHNETYADQRDRELDSINAFLRNENIKVNNEYVLFESNGIYMQVIND......................................................................................... | 95 |
9 | -3.060 | PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217] | ali follow.. | 17 | 260 | .PSDSLMTETLARVYVEQKNFSKA--LKYPEGFFADQIRAIEKLQEN.......................................................................................... | 313 |
10 | -3.010 | HGC00248 gi|162576253|dbj|BAAV01029229.1|2.0 TMP00024; | ali follow.. | 23 | 96 | ...........KKIESAIRIVGNENPYHPIRDYLNGL.................................................................................................... | 121 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Zmasek CM, Zhang Q, Ye Y, Godzik A. Surprising complexity of the ancestral apoptosis network. Genome Biol. 2007 Oct 24;8(10):R226 [Epub ahead of print] |