current user: public |
|
Query: HGC00933 gi|162753228|dbj|BAAZ01012194.1|2.0 TMP01261;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 | |||||||
# | Score | Template | Links and tools | %id | First | MSTWSGIRNKLENDYLCPALRGHIQYFATSYSKSADHEGRAAIRMDGVEVLRSNYYTYFENVWTKFHHLRSTTLKDCDSAKEAIDRSHAYALEQGTFDQKAFYEAFGIFDNQSIEKSLVSKNPLVRILALLDRRLGKRRLLALEESMEQELDWVRAFYVIRMQAEGLMEKE | Last |
1 | -99.600 | HGC00933 gi|162753228|dbj|BAAZ01012194.1|2.0 TMP01261; | ali | 100 | 1 | MSTWSGIRNKLENDYLCPALRGHIQYFATSYSKSADHEGRAAIRMDGVEVLRSNYYTYFENVWTKFHHLRSTTLKDCDSAKEAIDRSHAYALEQGTFDQKAFYEAFGIFDNQSIEKSLVSKNPLVRILALLDRRLGKRRLLALEESMEQELDWVRAFYVIRMQAEGLMEKE | 171 |
2 | -4.620 | PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821; | ali follow.. | 14 | 70 | ............................................................................................................IARRGDGQVVQLSRLLHLVASSVD---GSRDIETIAHRVSGRADNVRYLIEQKLDPLGVTVPE | 135 |
3 | -3.670 | PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] | ali follow.. | 11 | 54 | QGTWMNALKNVAGSLAATEAEKKMK---EYCAKVGIVEGVFNYVFNSDSTFTS--------------ALKRGSLKGTYSVSPEDKTVTLRYTVGNKKLTVSTLTAHVVLSGNELT-LLFNADKLLKFLSTVSSISSNTTLKAINKLASEYDGMMLGF.............. | 203 |
4 | -3.410 | PB012771 _Gut.Meta.Jp.0094636_ gi|162817068|dbj|BABA01027641.1||1 (+ 249:636~0 complete) | ali follow.. | 21 | 59 | ...................................................................................................................VRLIWADELAALLESVQREC-EEREAVLVREMAEAEAWVQRMEMICGRVEEVVCEE | 125 |
5 | -2.900 | HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833; | ali follow.. | 13 | 99 | ......................................................................................................................EEITPLDRLCYVGKRGMGALEFEPSSPINGMNESSVLHIEELTELAKSVFTDR | 151 |
6 | -2.510 | PB011130 gi|88806557|ref|ZP_01122074.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]gi|88783389|gb|EAR14561.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501] | ali follow.. | 13 | 19 | ....................................................................................................NAYQKLLRYLE-AVKRSFAGTAGSDEIIADIEARIAELFYEKMENE......................... | 63 |
7 | -2.410 | PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086; | ali follow.. | 12 | 69 | ................CVTAADTVRNNANEYNALLNGDAADAAAVKAEQVKDSKTV---------------------ESLGKELKASAPEYEGCVAENAQGLDAAAVK-LNEQADWYETHEKSLSKAVRAVVESKAAKRLDDAKTNLTAKLDEASKLLA---DSDGKVADN | 198 |
8 | -2.330 | PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151; | ali follow.. | 14 | 1 | ................................................................................................MATQAIDATIFASSHPDIAKRTSISGLLISCVMLL---IGILSFASTFELEDKSSTV.................. | 54 |
9 | -2.240 | PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991; | ali follow.. | 17 | 12 | .SRWDSLWPFL---FYCNFLKGVFLLRIAVVDGQGGGIGKHITARLRQEL......................................................................................................................... | 58 |
10 | -2.150 | HGC00803 gi|163280588|dbj|BABD01030100.1|2.0 TMP01051; | ali follow.. | 8 | 57 | .............................................................................................................IQETLDEAVCGINDLQEEFDENDSEI-----TVARDCIGVTVAYILEWFGIPIDIEEAIRER | 114 |
FFAS is supported by the NIH grant R01-GM087218-01
|
Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Lukasz Jaroszewski, Zhanwen Li, S. Sri Krishna, Constantina Bakolitsa, John Wooley, Ashley M. Deacon, Ian A. Wilson, Adam Godzik, Exploration of Uncharted Regions of the Protein Universe. Plos Biology. 2009 Sep. 7(9):e1000205 |