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current user: public |
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Query: HGC00965 gi|163282470|dbj|BABD01028218.1|2.0 TMP01310;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . | |||||||
# | Score | Template | Links and tools | %id | First | MKDRLSQWKEFYMIFVPMLHYLQNKNSFSGNEDGMRYLITPGKRSVPDPDGGEEAKKEEAILTVDLWPEPWTLDKTDPALRRREIFPMTEEGRTAVAQYLNDAYNAEPERWSAHPSILDCEPWTPPAPEPDAETQH | Last |
1 | -91.000 | HGC00965 gi|163282470|dbj|BABD01028218.1|2.0 TMP01310; | ali | 100 | 1 | MKDRLSQWKEFYMIFVPMLHYLQNKNSFSGNEDGMRYLITPGKRSVPDPDGGEEAKKEEAILTVDLWPEPWTLDKTDPALRRREIFPMTEEGRTAVAQYLNDAYNAEPERWSAHPSILDCEPWTPPAPEPDAETQH | 136 |
2 | -6.070 | PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033; | ali follow.. | 6 | 91 | .........................................................................EKSGAEKKTSTQVLVQAADLRDAVKKLDEGMKGTMADYQSETPLMDVYPYSAGPNDKPEFDP. | 156 |
3 | -4.550 | PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791; | ali follow.. | 9 | 77 | VHKRLDIINNRMSFCIQKVGMVRY-NAFADMGSDLSYSYA--------------DENNNGMIITGIYGRSETVTYAKPVKDGKSNYSLSVEELQALQRAKENTIDTLELQGFRSKKEL.................. | 181 |
4 | -3.360 | PB032818 Q5LA03_BACFN/1-211 PB032818; Pfam-B_32818; | ali follow.. | 9 | 98 | IKKNCRTQNDVQAYLFMYQGFSSDLMMLMGNLMQWKFRMPAIFKKA----RSMTEKTVHDVCTKTVWKADDVHKTAAAVRQYKERLGFSEQ-------WMSE-----------VYNIVLLAKKEPKHKDEEAKA.. | 211 |
5 | -3.170 | PB019279 Q5LE73_BACFN/1-147 PB019279; Pfam-B_19279; | ali follow.. | 8 | 42 | .......................................................YNKSLDLCSRPWADTFY-DADGNYCYQELNFYLDRHGEDYIRNWEDRSQYSLRMVYGPGDVSYLDDVWI............ | 126 |
6 | -3.040 | PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498; | ali follow.. | 12 | 59 | ........................................................EKDSLLTAVSKSIVYYDDEELDRYAGVLPEEYNTEAVEEFEEILSTLQEEEVPSWIRSLQMRQIQ--MPISIKEQA.... | 132 |
7 | -3.010 | PB025553 _HOMD.0078651_ pint_c_1_4510 Prevotella intermedia 17 [1755134 - 1755736] ORF | ali follow.. | 16 | 6 | ....................................................ELRKKSIAEYLLYMWQRVYGCSLTRIRKEYIDKFDYTDEQKEEEEDWFGDLVRMMNQEGCRENGHLQ................. | 77 |
8 | -3.000 | PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361; | ali follow.. | 7 | 33 | ............................TLSEGMYPLTFTAMQGEVVATPQTRVSDYDDTD-HKSKWDGGEVIGVKIGTDGAVGSYTLDSDGKPTTS-------TSNIPAYWQSTASQTVYGWYPNTADISLTGQD | 134 |
9 | -2.960 | HGC00579 gi|163284429|dbj|BABD01026259.1|2.0 TMP00679; | ali follow.. | 12 | 140 | .................................KVTYGMDFGRKRKTAAKRIQNEDTDTGILKG........................................................................ | 170 |
10 | -2.950 | HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167; | ali follow.. | 13 | 15 | ........................................................................................NKTDLDKIEDFLDDTFSEFTNRYGDSVDAEFSSRWVYPEEEIKK.... | 58 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |