current user: public |
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Query: HGC00993 gi|163626727|dbj|BABG01009540.1|1.0 TMP01352;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . | |||||||
# | Score | Template | Links and tools | %id | First | MFSLLLSTFAMMGLTFVIGFFVAGVIKLIASAADSLAFYSSHQEELARLKRIRKLHQKVATLITESALSDEEYGSDGREDFSRGVTKHPGDNRGFYHGVSPGESERGLMDYFYPEDTRTMFLRKEEQMLQHDKKNNKTSSTNKKQ | Last |
1 | -116.000 | HGC00993 gi|163626727|dbj|BABG01009540.1|1.0 TMP01352; | ali | 100 | 1 | MFSLLLSTFAMMGLTFVIGFFVAGVIKLIASAADSLAFYSSHQEELARLKRIRKLHQKVATLITESALSDEEYGSDGREDFSRGVTKHPGDNRGFYHGVSPGESERGLMDYFYPEDTRTMFLRKEEQMLQHDKKNNKTSSTNKKQ | 145 |
2 | -4.630 | PB012108 A3U600_9FLAO/1-189 PB012108; Pfam-B_12108; | ali follow.. | 14 | 1 | MLSLLLIEYNSITKRFLSGNIENSIFV--------------NQQNAMAKKEKKQLKKRLLHKYRMVILNEDTFEERVSLKLTR----AFTPLKEYIPGYSSTSLKLKATELTYKTDSLETALAINNQYYESIKK........... | 138 |
3 | -4.130 | HGC00690 gi|162868815|dbj|BABB01001192.1|3.0 TMP00870; | ali follow.. | 16 | 1 | MFEYILREIFLSVIAFLAGAGVSAGVFAFVLVIGVVP-------RILRCSRIENIILIENVMICGVVAGNISSVLDTA-PVSNICGNIIIAIYGLCVGIFVGCIAVALAEILFPIIYKRMKLRA..................... | 129 |
4 | -3.960 | HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561; | ali follow.. | 17 | 4 | ........LHARGLFHVLLLICNRELLLIGKRKDEDDMAKSTKTYEERIRALEKKEQESIEATKKLIAQRKELEKRKKAEESKKRTHRLCQIGGAVESV-EEEDLPKLIGFLKRQETNGKFFSKAMQ.................. | 126 |
5 | -3.940 | PB092941 Q45777_BACTN/1-139 PB092941; Pfam-B_92941; | ali follow.. | 10 | 1 | MAKIQIKSEQITGIFCVMEEFDALLSNIIDSTLGPRTKTFGYQYSEICVEDISTHLMSHLSFHPVLRSCSADTILRAIKELTVPNITYTSSVSGKSYDFNMADRMNELL.................................... | 125 |
6 | -3.890 | PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152 | ali follow.. | 12 | 1 | .LEKIISISGRPGLFEVHTQTRTGVV--ATSLVDGKRINANARNQVSLLSEINIYGLEKEVPLQEVLTMIHTKEEGKQCSVKP--KSPADELEAYFFDVFQDYDE----ERVYPSDIKKIIILAEKVPQVFKAETAEEESQEEVA | 140 |
7 | -3.420 | PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740; | ali follow.. | 15 | 47 | ....................QMVRALMLDDATAAKFPIYEKYLKELRECRMRARKDAAQGTEANTAKETPKPVMTDAEKDQFAQSRKMLDIREKYYNEFSKILSQKQIMKIYQQEKSNMNKFRKEFDRRKGQKPGQGHKPGQDRQ | 182 |
8 | -3.310 | PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF | ali follow.. | 9 | 9 | LLMAVGTGLYAFFIIQDVACIVMLIGAICFATMQMRQQYLGTNLTIRRLRKIM............................................................................................ | 61 |
9 | -3.160 | PB015954 Q6WBB3_BIFBR/1-225 PB015954; Pfam-B_15954; | ali follow.. | 8 | 8 | ..............................................................................................LWHGSSHVIKHPEYGMGKPNND---FYCTRSIELAKEWACAGLDDGF.... | 55 |
10 | -3.050 | HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455; | ali follow.. | 14 | 1 | ...........MKKLLLAMIAVAALISFAATYADQRDRELDSINAFLRNENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVLFESNGIYMQVINDGCGDY-------KGKTQNVLCRFTEYCLANRAKICDDAIT.... | 130 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7. |