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Query: HGC00993 gi|163626727|dbj|BABG01009540.1|1.0 TMP01352;, from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .
# Score Template Links and tools%idFirst MFSLLLSTFAMMGLTFVIGFFVAGVIKLIASAADSLAFYSSHQEELARLKRIRKLHQKVATLITESALSDEEYGSDGREDFSRGVTKHPGDNRGFYHGVSPGESERGLMDYFYPEDTRTMFLRKEEQMLQHDKKNNKTSSTNKKQLast
1 -116.000HGC00993 gi|163626727|dbj|BABG01009540.1|1.0 TMP01352;  ali  100  1MFSLLLSTFAMMGLTFVIGFFVAGVIKLIASAADSLAFYSSHQEELARLKRIRKLHQKVATLITESALSDEEYGSDGREDFSRGVTKHPGDNRGFYHGVSPGESERGLMDYFYPEDTRTMFLRKEEQMLQHDKKNNKTSSTNKKQ 145
2 -4.630PB012108 A3U600_9FLAO/1-189 PB012108; Pfam-B_12108;  ali follow..  14  1MLSLLLIEYNSITKRFLSGNIENSIFV--------------NQQNAMAKKEKKQLKKRLLHKYRMVILNEDTFEERVSLKLTR----AFTPLKEYIPGYSSTSLKLKATELTYKTDSLETALAINNQYYESIKK........... 138
3 -4.130HGC00690 gi|162868815|dbj|BABB01001192.1|3.0 TMP00870;  ali follow..  16  1MFEYILREIFLSVIAFLAGAGVSAGVFAFVLVIGVVP-------RILRCSRIENIILIENVMICGVVAGNISSVLDTA-PVSNICGNIIIAIYGLCVGIFVGCIAVALAEILFPIIYKRMKLRA..................... 129
4 -3.960HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;  ali follow..  17  4........LHARGLFHVLLLICNRELLLIGKRKDEDDMAKSTKTYEERIRALEKKEQESIEATKKLIAQRKELEKRKKAEESKKRTHRLCQIGGAVESV-EEEDLPKLIGFLKRQETNGKFFSKAMQ.................. 126
5 -3.940PB092941 Q45777_BACTN/1-139 PB092941; Pfam-B_92941;  ali follow..  10  1MAKIQIKSEQITGIFCVMEEFDALLSNIIDSTLGPRTKTFGYQYSEICVEDISTHLMSHLSFHPVLRSCSADTILRAIKELTVPNITYTSSVSGKSYDFNMADRMNELL.................................... 125
6 -3.890PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152  ali follow..  12  1.LEKIISISGRPGLFEVHTQTRTGVV--ATSLVDGKRINANARNQVSLLSEINIYGLEKEVPLQEVLTMIHTKEEGKQCSVKP--KSPADELEAYFFDVFQDYDE----ERVYPSDIKKIIILAEKVPQVFKAETAEEESQEEVA 140
7 -3.420PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740;  ali follow..  15  47....................QMVRALMLDDATAAKFPIYEKYLKELRECRMRARKDAAQGTEANTAKETPKPVMTDAEKDQFAQSRKMLDIREKYYNEFSKILSQKQIMKIYQQEKSNMNKFRKEFDRRKGQKPGQGHKPGQDRQ 182
8 -3.310PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF  ali follow..  9  9LLMAVGTGLYAFFIIQDVACIVMLIGAICFATMQMRQQYLGTNLTIRRLRKIM............................................................................................ 61
9 -3.160PB015954 Q6WBB3_BIFBR/1-225 PB015954; Pfam-B_15954;  ali follow..  8  8..............................................................................................LWHGSSHVIKHPEYGMGKPNND---FYCTRSIELAKEWACAGLDDGF.... 55
10 -3.050HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  14  1...........MKKLLLAMIAVAALISFAATYADQRDRELDSINAFLRNENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVLFESNGIYMQVINDGCGDY-------KGKTQNVLCRFTEYCLANRAKICDDAIT.... 130
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 5 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.