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current user: public |
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Query: HGC01179 gi|162738527|dbj|BAAZ01025469.1|2.0 TMP01658;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 | |||||||
# | Score | Template | Links and tools | %id | First | VVVSILFQKARKVLNNERGEANYFSTVVFIFIAVLLLAFIIDLFSIISTKQELDHAADQMVKQIQLSGGVNGETDELFEFLSSQIEGAENISYSIDATYTSPRPSGMTNAIQLGTPFFITIEGDAKLGGFWNFDLVNITVVARGSGVSEHYWK | Last |
1 | -86.600 | HGC01179 gi|162738527|dbj|BAAZ01025469.1|2.0 TMP01658; | ali | 100 | 1 | VVVSILFQKARKVLNNERGEANYFSTVVFIFIAVLLLAFIIDLFSIISTKQELDHAADQMVKQIQLSGGVNGETDELFEFLSSQIEGAENISYSIDATYTSPRPSGMTNAIQLGTPFFITIEGDAKLGGFWNFDLVNITVVARGSGVSEHYWK | 153 |
2 | -5.690 | HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907; | ali follow.. | 15 | 26 | .............LSDERGAGTVLVVGV-IAVLLAAALGVSGLIQAQAAAGRSRAAA-------DLAALGGATALSSIVAPGDPCEAASRVARANGAEVTTCSVTGEDVVVEVSVEARV.................................. | 123 |
3 | -4.880 | HGC00690 gi|162868815|dbj|BABB01001192.1|3.0 TMP00870; | ali follow.. | 20 | 102 | ...........................IFVGCIAVALAEILHTFPIIYKRMKLRAGLGIIVISMAIGKALGA................................................................................. | 146 |
4 | -4.880 | PB048631 gi|160885545|ref|ZP_02066548.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]gi|156109167|gb|EDO10912.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483] | ali follow.. | 13 | 1 | .............MKIK-----FLSFIASFFMVSFVITSCLD------DDNNIEYSPDATIHAFALDTAGLGSYKFTIDQLSREIYNEDSLPVHADTIIGNDSVININDSIDLREPLTIKVWSTEALAGINQTKEYTIKVNVHQHDPDSLRWN | 152 |
5 | -3.200 | PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete) | ali follow.. | 16 | 1 | .......................MRKLGFTLVAALAFSVSAFA----AGKWDGTINKAKLTKYLQLSSQQNEQVASICDYFQEQM.................................................................... | 67 |
6 | -2.800 | HGC00962 gi|162759780|dbj|BAAZ01005693.1|3.0 TMP01305; | ali follow.. | 15 | 92 | .ALQGVLEGTLGVFGERLGRLLL-KLAVEHNMTNHLLGGDMDM-----TRDEYSKMRGSSVREVATHGTIS.................................................................................. | 156 |
7 | -2.800 | PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863; | ali follow.. | 10 | 44 | .VLEKLKLNIRSLIASQEEDSDLLDLCIDVIYHNNMKAFGLQQLIKLYLTWLSKQEAEE.............................................................................................. | 102 |
8 | -2.770 | PB000795 Q74Z21_ASHGO/1-280 PB000795; Pfam-B_795; | ali follow.. | 15 | 201 | ......LQKADLVWPNWQARALYIDFWMLGDAAREL-----------WQKHRARELGNLVMNMFDPESTVDKCRKFLQKEFFDKYTDDPKV.............................................................. | 280 |
9 | -2.730 | PB011051 Q8A0P0_BACTN/1-227 PB011051; Pfam-B_11051; | ali follow.. | 22 | 1 | .......................MKTVFNIVLVLCAAALIYICYSSIMGPINFEKAKKE-IRKAQQEGMYTEHFDTLIDFVKNQ..................................................................... | 77 |
10 | -2.710 | PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104; | ali follow.. | 13 | 10 | ......FSKIRSRSCPFMQQNKFRKAIVAILMPMILVVSFGNCFGKFAIVKKVYEVNDGFNIGSGLLAKFIKTL............................................................................... | 77 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |