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current user: public |
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| Query: PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;, from HGM_OVER |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . | |||||||
| # | Score | Template | Links and tools | %id | First | MTLLGDKTASPYDTGTPVPGPGGMAVTYEQVATGGLPVAGLERPVVPRLSAGLKLHGEYQGSGFTEPKYIARRGDGQVVQLSRLLHLVASSVDGSRDIETIAHRVSGRFGREVSADNVRYLIEQKLDPLGVTVPEGREEEDISAPRSDLLLALKGHRVIFNERRVATIAGALAWLHRPVVVLAVLAGIAVLDVWLFAFFGAITPVLEVL | Last |
| 1 | -95.900 | PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821; | ali | 100 | 1 | MTLLGDKTASPYDTGTPVPGPGGMAVTYEQVATGGLPVAGLERPVVPRLSAGLKLHGEYQGSGFTEPKYIARRGDGQVVQLSRLLHLVASSVDGSRDIETIAHRVSGRFGREVSADNVRYLIEQKLDPLGVTVPEGREEEDISAPRSDLLLALKGHRVIFNERRVATIAGALAWLHRPVVVLAVLAGIAVLDVWLFAFFGAITPVLEVL | 209 |
| 2 | -7.730 | PB027778 Q5LHJ0_BACFN/1-110 PB027778; Pfam-B_27778; | ali follow.. | 10 | 1 | ................................................................................MGLEDDFLLNDADDEKTIEFIRNYLPQELKEKFSEDELYYFLDEYYSESGILDVQPDADGYVDIDLEQVVEFIVKEAEYDPEDILFVVQGEMEYG.................................. | 104 |
| 3 | -7.270 | PB002770 Q744K2_MYCPA/1-559 PB002770; Pfam-B_2770; | ali follow.. | 13 | 1 | MTMQGDAQCVRGNRNT-AAAQPSPWTARPFGDRLVGWDTYRRLDLLPYLSADTQSLSSFDRSGGDFDISTGNKNGTGGCLAPGGAGCVIAEDHGAGEVDSI............................................................................................................ | 127 |
| 4 | -4.750 | PB062763 Q9F6U5_BACTN/1-245 PB062763; Pfam-B_62763; | ali follow.. | 13 | 64 | .DIIGKSRFRMAPTRTTAAISTQEAAISEKGIELSEEEATFDDGNTETASRPTQVPEDKLDETFTSISPEELEASGSAFE-MRHAGKVMTELDGT----ELYSRITERLTDEPMSERLAKAMAVFVDTVNTTVAQPKTKVFVVLDN............................................................... | 236 |
| 5 | -4.620 | HGC00933 gi|162753228|dbj|BAAZ01012194.1|2.0 TMP01261; | ali follow.. | 14 | 109 | .....................................................................FDNQSIEKSLVSKNPLVRILALLDGKRRLLALEESMEQE------LDWVRAFYVIRMQAEGLMEKE.......................................................................... | 171 |
| 6 | -4.540 | PB003564 gi|46242789|gb|AAS83494.1| TraD [Bacteroides fragilis] | ali follow.. | 16 | 64 | .DIIGKSRFKMASTRTTAAIPTQEAATSEKGIELSEEEATFDDGNTETVSRPTQVPEDKLDETFTSIPPSELEASGSSFE-MRHAGKVMTELDGT----ELFTRITERLTDEAMSERLAKAMAVFVDTVNMTVTQQKEKVFVIP................................................................. | 234 |
| 7 | -3.860 | PB011130 gi|88806557|ref|ZP_01122074.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]gi|88783389|gb|EAR14561.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501] | ali follow.. | 13 | 10 | ..........................................................................ANMLFHIDENAYQKLLRFAGTAGSDEIIADIEARIAE-ITQKEVDAVIAIMGQPEDYQVDEDIFEDVPPGTGSA............................................................. | 102 |
| 8 | -3.780 | PB044380 A7LRP7_BACOV/1-223 PB044380; Pfam-B_44380; | ali follow.. | 10 | 59 | .GIMGSTCFVYLDEDAGKSVAPYMSQPLETAADFIGEEEDVAEEEVECKPAVDAVSRVVTPDDLDNAGNVLFKLNDA--EKSLRAALTLHTIRETDLFEIFSSQVENK-------NVIDSLMGKYLDGNGNPLSVRKTKSVVPVS................................................................ | 217 |
| 9 | -3.590 | PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg] | ali follow.. | 7 | 85 | ............EVEAPKDSVKYQFNLTREQQATNRSKLREAKLLRENRIE--SYYDEALAENVPDAKEILHLAKGNFMEINQDRLALLKTLKVKDYKDVTASVLEDHLKVRESSYKYRPVYKDNIAHEDSIVYKESIEFNDSCVYNDSIAYFAMEYIVCPRIYLEELTA....................................... | 256 |
| 10 | -3.020 | PB046158 _JGI.0336690_ 2004028347 [Human Gut Community Subject 8] | ali follow.. | 9 | 69 | .........................................................................................KKPHGKQTIKQLNAQGVQLSNIKITDENIKSF-DRVARKYGI.............................................................................. | 109 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Lukasz Jaroszewski, Zhanwen Li, S. Sri Krishna, Constantina Bakolitsa, John Wooley, Ashley M. Deacon, Ian A. Wilson, Adam Godzik, Exploration of Uncharted Regions of the Protein Universe. Plos Biology. 2009 Sep. 7(9):e1000205 |