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Query: PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;, from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTHMARKPLGKYRQREIRTVGLMIALYEKRHPETDASTQYNDLFSYAIKRLERCHFGEDKPACKHCPIHCYQPARREAIKAIMRWSGPRMLLRHPILAIRHLIDDHRPVPDYPKRETSAKTSTGRTARLATQRATSADSDADKVKSLast
1 -75.700PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;  ali  100  1MTHMARKPLGKYRQREIRTVGLMIALYEKRHPETDASTQYNDLFSYAIKRLERCHFGEDKPACKHCPIHCYQPARREAIKAIMRWSGPRMLLRHPILAIRHLIDDHRPVPDYPKRETSAKTSTGRTARLATQRATSADSDADKVKS 146
2 -5.330HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;  ali follow..  11  68....................................CQGCRV----NMCGIRQCALEKGVATCGDCLDLC............................................................................ 108
3 -4.370HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907;  ali follow..  54LIQAQAAAGRSRAAADLAALGGATALS-SIVAPGDPCEAASRVARANGAEVTTCSV-TGEDVVVEVSVEARVLGVSRPAVSSAR-AGP.......................................................... 138
4 -2.880PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]  ali follow..  14  151.....................HVTLIGCPKLDSVDYSEKLTEIIRRNDIQSVTIVRME--PCCG---------GLEMAAKKALQDSGKFIPWQVATISID.............................................. 219
5 -2.710HGC00921 gi|162841401|dbj|BABA01003308.1|3.0 TMP01242;  ali follow..  199VEAKFQDVSPNEKRLEKCRDYGLIIIIGPEKNRRRFFKICLSILQKITFRYGTCP-------CCRCDAYLYA.......................................................................... 273
6 -2.570PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890;  ali follow..  23  2..........................................................DPPVCS--RFGCY----------LLLFACPIIFAS..................................................... 27
7 -2.300PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;  ali follow..  106...................................................................TFRLRKHQSSRLVNVPK---LKKHVFYGHVCVQHDVKDLPIVHSFSEEENDIHAYDVTFLPQKEEVEYVEKDEQTTIKA 181
8 -2.280PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;  ali follow..  15  1.................................................................................MLRRSVPKSIWRTPFTVWRRSWAATSKPPSGNLPKSGETRKQPTIKNEFINEKRKMRMNLPKVK. 72
9 -2.250PB044822 Q89ZL7_BACTN/1-147 PB044822; Pfam-B_44822;  ali follow..  50.............DDDEELANVMIEEWATYD-GDDFMENVKPNLKSTLCRMKDAGDFDKVTILKPYSF-VLVDEDKETVAELLLIDDDTLLVDDELL................................................. 131
10 -2.080PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]  ali follow..  80..............................................................................LEHMIQFQRPKIRPYVTDNYYAALLRQAKAEKEVEEIVRLSQKEKSGEKNIHNAGGVKQSRPDGSKGN 149

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 2 2 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Slabinski L, Jaroszewski L, Rodrigues AP, Rychlewski L, Wilson IA, Lesley SA, Godzik A. The challenge of protein structure determination--lessons from structuralgenomics. Protein Sci. 2007 Nov;16(11):2472-82.