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current user: public |
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Query: PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759], from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 | |||||||
# | Score | Template | Links and tools | %id | First | GAITFVEREAAAYDEAAVMANKQARLDAEKSINMVGSGVMHEKSPAHSGCPGSMARSIFRRPAAASGEAVQASSYEQAAVECVQNTTDKTVNQQAGDIYNYERPSQLTQWPVQIKLAPVNAPYFDGAKLLIAADCTAYAYASFHEKFIKGHVTLIGCPKLDSVDYSEKLTEIIRRNDIQSVTIVRMEVPCCGGLEMAAKKALQDSGKFIPWQVATISIDGRIL | Last |
1 | -106.000 | PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759] | ali | 100 | 1 | GAITFVEREAAAYDEAAVMANKQARLDAEKSINMVGSGVMHEKSPAHSGCPGSMARSIFRRPAAASGEAVQASSYEQAAVECVQNTTDKTVNQQAGDIYNYERPSQLTQWPVQIKLAPVNAPYFDGAKLLIAADCTAYAYASFHEKFIKGHVTLIGCPKLDSVDYSEKLTEIIRRNDIQSVTIVRMEVPCCGGLEMAAKKALQDSGKFIPWQVATISIDGRIL | 223 |
2 | -5.920 | PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119; | ali follow.. | 13 | 224 | ..................................................................................AQIVRINTIRPNPNPNPNEIFNFDLNNLPIENGLLTVEAIWFLQSKMELTDTATVIAYVNINKNSVKHNNFAVNYLKSEENNWY-PLLGLFVEKFFKDVEVFSPKIP---ALYFVVNNSTKNIFSSVGISSLSTN-NPKLI | 371 |
3 | -3.900 | PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815; | ali follow.. | 13 | 356 | ...............................................................................................................YAFIVPKQASDLLTEGKAL--SHCVG---SNYIKQHIEGKTTIIFVRDKQDLE--KSLYTL----EYKNGQIYQLNCDPTKDVQMAANKWAKLLKSKTKVLQ.......... | 451 |
4 | -3.890 | PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946; | ali follow.. | 9 | 171 | ...................................................DNATRKIEAIHEKERAAEQRRWEIERREREQQRQLQRKKDAEDFIANKSKFFGLVITDEEIIVKVLESIDEYYNEGKTQ--GICVF------SGYYKKADTLILSARIGDEIIETVEV-------DLRTLEVVQCDTEYHERIIDLVNKNANLIRERMK............. | 321 |
5 | -3.740 | PB002104 Q72PH8_LEPIC/1-220 PB002104; Pfam-B_2104; | ali follow.. | 18 | 3 | .............................................................................................................................................NFKEKIQFSKIRSRSCPFMQQNKFRKAIVAIL------MPMILVVSFGNCFGKFAIVKKVYEVNDG................ | 62 |
6 | -3.440 | HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348; | ali follow.. | 8 | 27 | .................................................................................................................................LDCEKCDAYIATINDNQELRKKTACQGCRVDGIKTVF-GIRQCALEKGVATCGDCL-DLERCPTVGEILENNPSALKN................ | 124 |
7 | -3.150 | PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934; | ali follow.. | 10 | 139 | ..................................................................................TDSQAIDVVHPWTLDRSSGRPLVPITTFSIAMAYQQNGGRL-DGDRVLISEACNHNRITSACNDIGMVQI-----PNKLEAALGGKKLQILESGGMDGLKLAIHCGGCMIDAQKMQQRMKDLHEAGVPVTNYGVFF..... | 292 |
8 | -3.010 | PB048276 _Gut.Meta.Jp.0112258_ gi|163310311|dbj|BABD01000385.1||2 (- 258:885~0 complete) | ali follow.. | 8 | 40 | .......................................................................................................TVDLALFTMYLAMDAGLKGSDNDVQVLLVYDKQSGKLEHCLPSDLKGEFSFMAAPSEGGDLYLDLLQIVLNAAEVKKLIVVPFNEEYGKEVENVLRECALENAGHKEEAKDIV....... | 168 |
9 | -2.860 | PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030; | ali follow.. | 14 | 22 | ......................................................................................................................................................LMIALYEKRHPETDASTQYNDLFSYAIKRLERCHFGE-PACKARREAIKAIMRWSGPRMLLRHPILAIR.... | 100 |
10 | -2.520 | PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890; | ali follow.. | 9 | 6 | ......................................................................................................................................CSPWGRFGCY-------LLLFACPSIMKKEFIGRTAKSLALAIFSGCIFGSV---LPAWSQEIVAGELERCFLAMPESVL......... | 81 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |