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current user: public |
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Query: PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 | |||||||
# | Score | Template | Links and tools | %id | First | MMMSVTFPPGRPLSNFLLEGTIMKLTVYFDGTFWFALVEHVNRKGQYKVFRYPFGKEPKDSDIWNFIAKKLPSLIKKYDHIKTSSHADSIPQPKKMNPKRMQRVLNKSKKQSAVSTKAQAEMQKLHEALKKEKKSQSKEKRQALKQYKYQLKQEKRHQKRQG | Last |
1 | -99.400 | PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142; | ali | 100 | 1 | MMMSVTFPPGRPLSNFLLEGTIMKLTVYFDGTFWFALVEHVNRKGQYKVFRYPFGKEPKDSDIWNFIAKKLPSLIKKYDHIKTSSHADSIPQPKKMNPKRMQRVLNKSKKQSAVSTKAQAEMQKLHEALKKEKKSQSKEKRQALKQYKYQLKQEKRHQKRQG | 162 |
2 | -5.590 | HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178; | ali follow.. | 13 | 4 | ...................................................................................................................PKNLEQLRAEKEQVETQLAQEQHKLKRLENRKKYLEKGERQKRTHR. | 49 |
3 | -5.260 | PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7] | ali follow.. | 16 | 89 | ...............................................................................................QRPKIRPYVTDNYYAALLRQAKAEKEVEEIVRLSQKEKSGEKNIHNAGGVKQSRPDGSKGNRKKR.. | 153 |
4 | -4.190 | PB015266 gi|154494998|ref|ZP_02034003.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]gi|154085548|gb|EDN84593.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184] | ali follow.. | 6 | 23 | ..................................................................................................................AQTSKAAXXXXXXXXXXXXXXXRLAKDAVMGEEAFNNAMQAITNRS.. | 68 |
5 | -3.830 | HGC00429 gi|162734516|dbj|BAAZ01029480.1|1.0 TMP00411; | ali follow.. | 6 | 121 | ......................................QQVTGEIFQAWGAITYAHPLTEREMYELRPSRNNLDIRRQMDAQAQVVGKWEDAHHVPDQKRLTWFYPDFGSYVVKEYVTPDQLAVRVRSIERQEAARAHKEAKRQPPIAEQLKAAQREAQGH. | 245 |
6 | -3.810 | PB030138 Q7MX14_PORGI/1-113 PB030138; Pfam-B_30138; | ali follow.. | 10 | 24 | ............................................................................................QRRDELEKRIERIRREVEQEEQAELDGQSSSHDYSGYRPRIRGTFVEGTQHLKERQLQGETQSTRSGR.. | 91 |
7 | -3.520 | PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete) | ali follow.. | 9 | 33 | ..................................................................................................WDGTINKAKLTKYLQLSSQQNEQVASICDYFQEQMKVANSSKKNSDQKVRNAVYGNLKLMK... | 93 |
8 | -3.330 | PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205; | ali follow.. | 3 | 118 | ..................................................................................................VNVPKLKKHVFYGHVCVQHDVKDLPIVHSFSEEENDIHAYDVTFLPQKEEVEYVEKDEQTTIKA | 181 |
9 | -3.290 | HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561; | ali follow.. | 22 | 27 | .........................................................................................................RKDEDDMAKSTKTYEERIRALEKKEQESIEATKKLIAQRKELEKRKKAEESKKR... | 80 |
10 | -3.190 | PB036876 Q56VH6_BACFR/1-141 PB036876; Pfam-B_36876; | ali follow.. | 8 | 56 | ..........................................................TDGEIYGQAVHYYDE----------NEIEVGKPIQCQVAVNHVVELTAEEKAEARQNAIRQYQDEEVRRLQNRNKPRTATKATVQEVQQ............... | 134 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Grynberg M, Topczewski J, Godzik A., Paszewski A. The Aspergillus nidulans cysA gene encodes a novel type of serine O-acetyltransferase which is homologous to homoserine O-acetyltransferases. Microbiology. 2000 Oct;146 ( Pt 10):2695-703. |