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current user: public |
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Query: PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 | |||||||
# | Score | Template | Links and tools | %id | First | MNKRTWIEKLIGHLLPKDEKDGKKLTKYHYFLLLFVLGVSFMLVSQIFSSEPSQEPAADQPAASQKATSESTVQSGEGEKEVFKPASDDKPKESIQDYEQEYENQLKDILETIIGVEDVSIVVNVDATSLKIFEKNRKTQETSTNETDKQGGKRTVSEMSSDEEIVIIKNGDKETPVVVQTKKPDIRGVLVVAQGVDNVQIKKTIIEAVTRVLDVPSHRVAVAPKKMKED | Last |
1 | -73.800 | PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645; | ali | 100 | 1 | MNKRTWIEKLIGHLLPKDEKDGKKLTKYHYFLLLFVLGVSFMLVSQIFSSEPSQEPAADQPAASQKATSESTVQSGEGEKEVFKPASDDKPKESIQDYEQEYENQLKDILETIIGVEDVSIVVNVDATSLKIFEKNRKTQETSTNETDKQGGKRTVSEMSSDEEIVIIKNGDKETPVVVQTKKPDIRGVLVVAQGVDNVQIKKTIIEAVTRVLDVPSHRVAVAPKKMKED | 230 |
2 | -3.850 | PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791; | ali follow.. | 9 | 38 | ...................................................................................................SNLKDKYKRLVK---GTDGKNIESVLMQHIEKVEEAQVEVEKVHKRLDIINNRMSFCIQKVGMVRYNAFADMGSDLSYSYALLDENNNGMIIVKDGKSNYSLSVEELQALQRAKENTIDTLELQGFRSKKE | 180 |
3 | -3.800 | PB021443 Q5LG43_BACFN/1-226 PB021443; Pfam-B_21443; | ali follow.. | 12 | 55 | ......................................................................................................DLYIGKVAEHLNSV--------------QVLSTHDNKVREEMAKD-----IRSLVQSSKYELLMKQKSTVSGSEVYVNRKGSKVKELIMVMNGASSLKF-------VYMEGDMTTDDIKKLMLYQSTS | 156 |
4 | -3.370 | PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815; | ali follow.. | 11 | 317 | ...............................................................................VIAHDNAVKLLYQMKHEVEEQQYKVRFEKIKDLEKTIDNYAFIV---KQASDLLTEGKALSH---------GGSNYIKQHIEGKTTIVRDKQDLEKSLYTLEYK---NGQIYQLRGKHNCDPTKDVQMAANK---AKLLKSKTKVLQN... | 452 |
5 | -3.200 | HGC01213 gi|163579070|dbj|BABE01006032.1|2.0 TMP01709; | ali follow.. | 8 | 74 | ............................................................LGRGIGAVNSMIHHDEVYAISRDATPAPKKVSNVKDCSASDVTLQLSAASQSVPVGGSLDFTATIVHEGSGNYLVDGSDSGRVLTITSGQETIYKSDVCPADSRLLLMAKGDKDV....................................................... | 188 |
6 | -3.010 | PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361; | ali follow.. | 13 | 125 | ....................................................................TADISLTGQDNTGNKFPYVLKGVSSKQYSYKENVQLNLEHQLVK--------FRVKLNGDVPNLSDAKVFFYGYPTCKNEYG----TVIPQGDKTYLATRKVGDYYTAMLAPDTKTSNNFVKIEVYG................................... | 239 |
7 | -2.620 | PB002770 Q744K2_MYCPA/1-559 PB002770; Pfam-B_2770; | ali follow.. | 9 | 19 | .......................PLAARLFPAMFALLMLVIAGTGSAAAQPSPWTARPFGDRLVGWDTSADTQSLQLSSFDRSGGDFDISTGNKNGTGGCLAPGGAGCVIAEDHGAGEVSIWLTRDGGNLRVELDGQTVLDTPVQSLVDGQLGAPFVWPLVANAGESPGGDYIKVPM------PYRRSMRISVES................................... | 201 |
8 | -2.390 | PB044380 A7LRP7_BACOV/1-223 PB044380; Pfam-B_44380; | ali follow.. | 12 | 46 | ..................................................................................................ELENVLSEPGGESGIMGSTCFVYLDEDAGKSVAPYMSQPLETAADFIGEEEDVAEEEVECKLPLEEMRMLKEEQEELDGTYPAVDAVSRVV-VLFKLNDADKDEEKSLRAALTLHTIRETDL.......... | 176 |
9 | -2.250 | PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92] | ali follow.. | 8 | 4 | .................................................................................................DKGGPEAHFKRYIKEHVKGKKTGLFITLGADPAGEHGESMLKVGRE----------------------------------LLNEGGNEILAEFI-CQGAIDPKVIEEMKEMAAK................... | 82 |
10 | -2.210 | PB062763 Q9F6U5_BACTN/1-245 PB062763; Pfam-B_62763; | ali follow.. | 7 | 1 | ...........................MTKVFLIVSVACNVWFLLMLLSLGTKSEKQDTLHSEASDEDADIIGKSRFRMAPTRTTAAISTQEAAISEKGIELSEEEATFDDGNTETASRPTQVPEDKLDETFTSISPEELEYGEDEPEDDEPGKAFEDIDMAVRTIKKDSPSEAEMRHAGKVMTELDGTELITERLTDEPMSERLAKAMAVFVD................ | 217 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Luz JG, Hassig CA, Pickle C, Godzik A., Meyer BJ, Wilson IA. XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators. Genes Dev. 2003 Apr 15;17(8):977-90. Epub 2003 Apr 02. |