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current user: public |
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Query: PB004476 gi|139436894|ref|ZP_01771054.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]gi|133776541|gb|EBA40361.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986], from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 | |||||||
# | Score | Template | Links and tools | %id | First | PTHARGDRGPARKSAGNNKSGKKTTLFVVLGLIVIVYIVGVVAFSQVAYPNTIIAGVDVSFSNASSAATKVNSAWKHYKLTVTGDDFSWTYQPESNEPIVDGEAAAKEIISHNEAFVWPVRLVESLSGKTKTTATSNEVDLDQDVDLSMLSDTFDQKKFEKDLGAAIDEFNEGRSGTFEANSSYDEQAGKFTVEKARSNEKLNREHVIKYAELELASLAETVDLSKLGNDAYEPLNGTLTDDQIQAACNAANNFLGVNVTLKLNGEDAGKVDGSSVLQWISFADPANPTLDTSQISSWAAELANGFNTVGSTRWWTRADGKQCAVEGGDFGWSIDSSSLAKQVEDAINNKQTGEIEIKYSQK | Last |
1 | -104.000 | PB004476 gi|139436894|ref|ZP_01771054.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]gi|133776541|gb|EBA40361.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986] | ali | 100 | 1 | PTHARGDRGPARKSAGNNKSGKKTTLFVVLGLIVIVYIVGVVAFSQVAYPNTIIAGVDVSFSNASSAATKVNSAWKHYKLTVTGDDFSWTYQPESNEPIVDGEAAAKEIISHNEAFVWPVRLVESLSGKTKTTATSNEVDLDQDVDLSMLSDTFDQKKFEKDLGAAIDEFNEGRSGTFEANSSYDEQAGKFTVEKARSNEKLNREHVIKYAELELASLAETVDLSKLGNDAYEPLNGTLTDDQIQAACNAANNFLGVNVTLKLNGEDAGKVDGSSVLQWISFADPANPTLDTSQISSWAAELANGFNTVGSTRWWTRADGKQCAVEGGDFGWSIDSSSLAKQVEDAINNKQTGEIEIKYSQK | 362 |
2 | -3.970 | PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276; | ali follow.. | 4 | 2 | ............................................................................................................................................................SNIEQAYRGYGFAGRGQKNGCTVYQLKGEGGSGEMVCYDIAPGIQMSFNQLMDSTFQSIAPVKKFLQID----------------------------CIEGCYEVEYQNGTVSFLGEGDLCVTDLSRQVVTLFLEVEKAQHTLSAGFPQAEINLAGIVNELCGKEQSLL--------VKSREDVERIFGKLSEVDERIQAPYYWIK | 186 |
3 | -3.710 | HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861; | ali follow.. | 3 | 17 | ..............................................................................................................................................................................................LVLPSCSKDDVNVTLTPSEEVVNAFQQ-PDVKNVKWEILVGAYEAEFIYSGTYSENGQHIVLDKVEAQAYITQGG------------KWVRSEFD----VTKDYQDSSSLVVPRAVRETIAAKGKKVDDVKLFDWSDRNDYFYVEFDEPDSELL.................. | 155 |
4 | -3.380 | PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086; | ali follow.. | 9 | 14 | ETPAENITEPSKDGRKCPKWLLPLVAAVCAVILVVAGIIGWNAYSGA---AEAKEACVTAADTVRNNANEYNALLNGDAADAAAVKAEQVKDSKTV-------ESLGKELKASAP----------EYEGCVAENAQGLDAAAVKLNEQADWYETHEKSLSKAVRAVVESKAAKRLDDAKTNLTAKLDEAS-KLLADSDGKVAD............................................................................................................................................................... | 197 |
5 | -2.970 | PB144506 _Gut.Meta.Jp.0101058_ gi|162866171|dbj|BABB01003836.1||1 (- 121:946~0 complete) | ali follow.. | 8 | 38 | ........................................................................................................................................................NYSEIELGGNIEYSGNNFWGNRSNKKFPVFKYTHGRSASLKITID-------ENLFPLLSIKSNNGRLAIRIQDGTRIKPTQYVIEGSSKTLKYLFEAQNAFSEDQLEIKISGSSDVKFPHNVKLRLGEFSVSGSGDLVFADLDC-------------KNLTSKVSGSGDITLKGKADEARYS........................... | 207 |
6 | -2.850 | HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234; | ali follow.. | 17 | 3 | ..................................................................................................................................................................................................................................................................................................KKKRGEERMKEEDNILKKVGKKNSFKVPEG----------------ENLTSEVMGKLPEKEGPAFE...... | 54 |
7 | -2.530 | HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920; | ali follow.. | 7 | 44 | .......................................................GLSYTTFTQEIQGQPEISVNIDSETGAPQAYATFNVKVTNTG-KVPGKTSVQIYGQAPYT--------GGLEKVAIQLLNFEKSSELAPGASEIVSVKVDLQYIASY--------DMEHDNGDGTTGTYVLDPGTYYFAAGNGAHDALNNILVLQGADESKMVGTGSAAAAVAQEITEDLISRTAFSVSKTGEKISNQIPYADWNYYQPGEVTYLTRADWAGTFLMFYQMFGLDFDDPKWDELLDKMTPGVESIGTVETYMTENAGN--------GVAVNLN......................... | 357 |
8 | -2.330 | PB048631 gi|160885545|ref|ZP_02066548.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]gi|156109167|gb|EDO10912.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483] | ali follow.. | 9 | 2 | ..................KIKFLSFIASFFMVSFVITSCLDDDNNIEYSPDATIHAFALDTAGLGSYKFTIDQL----------------------REIYNEDS---------------------------------------------LPVHADTIIDKILIKTLTTASGVVTMKDKSGNDSVININDSIDLREPLTIKVWSTEALAGISPNQTKEYTIKVNVHQHDPDSLRWNHVGKMQDEIIGEQKTIEFNNKILTYSVVEGKNLKVYQNSNYSNWTAAGTNTTGDLTSTLPNS-ILPLNGIILATANNKVYESTDGVA........................................ | 238 |
9 | -2.290 | PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361; | ali follow.. | 9 | 2 | ................KIERLFIYCLLAGTSLLASCNSEDMTDNPVETLSEGMY--LTFTA-MQGEVVATPQTRVSDYDDTDGKHKSKWD-GGEVIGVKIGTDGAVGSYTLDSDGKPTTSTSNIPAYWQSTASQTVYG-------NTADISLTGQDNTGNKFPYVLKGVSSKQYSYKENVQLNLEHQLVKFRVKLNGDVPNLSDAKVFFYGYPTCKNEYGTVIPQGDKT----YLATRKVGDYYTAMLAPDTKTSNNFVKIEVYGLTYYYNPDIELVKGTVYTYTVNKVDIPYEIIDNNGNSVSGFENISKDISISGTHIPGLTITGTCTVTMNSAAISANGKPGISVENDNVTLTLIVK.. | 334 |
10 | -2.250 | PB069407 _HOMD.0084606_ pint_c_2_12 Prevotella intermedia 17 [3585 - 4295] ORF | ali follow.. | 9 | 2 | ..................NKRLNLYCTILLCIMSAVILYSFYAVSKDMVSGFTAGVRSADIEAKIRNDKNYANSEEYKKLMQERDESEAWARAATISFKADLNAEPATFVNQKTG....................................................................................................................................................................................................................................................... | 98 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |