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current user: public |
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Query: PB004718 Q5LIA4_BACFN/1-189 PB004718; Pfam-B_4718;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . | |||||||
# | Score | Template | Links and tools | %id | First | MKVKTSILLLLMIATALPSFGGNGNGNGTDSLQATRYVTRATMYGVGYTNVFDTYLSPQEYKGIEFRISRETMRMTTLGDGNVSVQNFFQANLAYTHNRVDNNNTFAGLVNWNYGLHYQFRITDNFKLLAGGMGDFNGGFVYNLRNTNNPASARAYINLDASGMAIWHTKIKNYPLALRYQVNLPVIGV | Last |
1 | -105.000 | PB004718 Q5LIA4_BACFN/1-189 PB004718; Pfam-B_4718; | ali | 100 | 1 | MKVKTSILLLLMIATALPSFGGNGNGNGTDSLQATRYVTRATMYGVGYTNVFDTYLSPQEYKGIEFRISRETMRMTTLGDGNVSVQNFFQANLAYTHNRVDNNNTFAGLVNWNYGLHYQFRITDNFKLLAGGMGDFNGGFVYNLRNTNNPASARAYINLDASGMAIWHTKIKNYPLALRYQVNLPVIGV | 189 |
2 | -8.640 | PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete) | ali follow.. | 3 | 1 | MRKLGFTLVAALAFSVSAFANNANDTINVAGKWDGTINKAKLTKYLQLSSQQNEQVASI.................................................................................................................................. | 59 |
3 | -7.840 | PB012823 Q5LCS8_BACFN/1-272 PB012823; Pfam-B_12823; | ali follow.. | 16 | 7 | MIKYIATLLLTVLFVACNNGKGQQPSEENEDPKAKEILQPLMRIIGDTIYYSDAQSAPVYFK............................................................................................................................... | 78 |
4 | -6.950 | PB009671 Q5LCM2_BACFN/1-111 PB009671; Pfam-B_9671; | ali follow.. | 10 | 1 | MKK--VLVALTMVMGMGSAVAFAQEPVKLPAMEQNQQTSQDKFTKITVKELPQVVKSTLSYEGTIVK.......................................................................................................................... | 67 |
5 | -6.560 | PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013; | ali follow.. | 12 | 1 | MKRNYFFTMLAAVLLAVAGANAQESAEFRPA.............................................................................................................................................................. | 31 |
6 | -6.490 | PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492] | ali follow.. | 7 | 1 | MKKTIFYSLFSALFMLTSCSMFEIDNYEEPS---------ETIWG----EVVDEATKRVLTDQGSEGIRVRLTELSWGDNVQHNPDFYCMMDGTFQNTKIFKGEYNVRIDGPFINTDGTLLHDGSVNTEISGTTKVKFEVQPFLNVEFVGNPQVSNGVIKAQVRVT....................... | 159 |
7 | -6.470 | PB015266 gi|154494998|ref|ZP_02034003.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]gi|154085548|gb|EDN84593.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184] | ali follow.. | 10 | 1 | MKRIVSMMVIFTLLLGGMTHVQAQTSKAAXXXXX........................................................................................................................................................... | 34 |
8 | -5.960 | PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621; | ali follow.. | 18 | 1 | MKYVKILFAMALVLTMCSAFSLKKGHSKT-----------VYAFGIA-ASFTDTYFTDIQ................................................................................................................................. | 50 |
9 | -5.850 | PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740; | ali follow.. | 11 | 1 | MKTKFIYVVLMALFLGSQMTLSAQNEENKEQMMQMQTNQMVRALMLDDATA--AKFTPI-YE............................................................................................................................... | 67 |
10 | -5.750 | HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861; | ali follow.. | 11 | 1 | MKTLKITFVMLMTALFLVLPSCS-KDDVNVTLTPSEEVVNAFQQKYPDVKNVGAYEAEFIYSGTYSENGQHIVLDKVEAQAYITQGGKWVRSEFDVTKDYQDSSSLVVPRAVRETIAAKGKKVDDVKLF-----DRNDYFYVEFDEPDSELLINFDGTL.............................. | 162 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |