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current user: public |
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Query: PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 | |||||||
# | Score | Template | Links and tools | %id | First | MQWVLTFVEMYGTYFILGSFLLNLLLVLLLIIYNTTTSNLKDKYKRLVKGTDGKNIESVLMQHIEKVEEAQVEVEKVHKRLDIINNRMSFCIQKVGMVRYNAFADMGSDLSYSYALLDENNNGMIITGIYGRSETVTYAKPVKDGKSNYSLSVEELQALQRAKENTIDTLELQGFRSKKEL | Last |
1 | -84.700 | PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791; | ali | 100 | 1 | MQWVLTFVEMYGTYFILGSFLLNLLLVLLLIIYNTTTSNLKDKYKRLVKGTDGKNIESVLMQHIEKVEEAQVEVEKVHKRLDIINNRMSFCIQKVGMVRYNAFADMGSDLSYSYALLDENNNGMIITGIYGRSETVTYAKPVKDGKSNYSLSVEELQALQRAKENTIDTLELQGFRSKKEL | 181 |
2 | -4.760 | PB078508 A6TV41_9CLOT/1-155 PB078508; Pfam-B_78508; | ali follow.. | 10 | 12 | ........................................ELFYKEMLARTNQTDVYETTRKHIEDLFDFKEGGIMPEHLHQPYQTGTSYKVTRMAYNLWNGYVEEGESLTTPSSLFACEYAAEFHQAIKIRFSEYYRERDFEKSSLRKQIKDLTEKNVIESTNAKEHS............ | 152 |
3 | -4.550 | HGC00965 gi|163282470|dbj|BABD01028218.1|2.0 TMP01310; | ali follow.. | 9 | 1 | ............................................................................MKDRLSQWKEFYMIFVPMLHYLQNNSFSGNEDGMRYLIT--AKKEEAILTVDLWPEPWTLDKTDPALRRREIFPMTEEGRTAVAQYLNDAYNAEPERWSAHPSIL | 118 |
4 | -4.400 | PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025; | ali follow.. | 10 | 12 | .........................................................................FSDMKSDSPDLKTAMLGRIRADEVWTPSDFVDLASRDAVDKTLQRLTKAEALR-----RIDRGLYDQPGFNKLTQKPNPPDPRSVIDAVGRRDQTRMLVDGMTAANDL | 117 |
5 | -4.310 | PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520; | ali follow.. | 11 | 28 | PQPVTALLAAMITPAVLISGAGTLIMST-----STRVGRATDRVRGL-----TSRFKQLVSAEGQNEPLAREEKRLIIRQLPRLSRRTRFLMRALQAFYTSVALLVLTSILLGLDGLFDVNTGSLPLLVALGGSVSLAYGALL---YEARYS----ATTKEEMRFLEELGQHYAELYADEL | 194 |
6 | -3.860 | PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645; | ali follow.. | 9 | 100 | .....................................QEYENQLKDILEGVEDVSIVVNVDATSLKIFEKNRKTQETSTNETDKQGGKRTVSEMSSDEEIVIIKNGDKETPVVVQTKKPDIRGVLV---------------VAQGVDNVQIKKTIIEAVTRVLDVPSHRVAVAPKKMKED. | 230 |
7 | -3.790 | PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946; | ali follow.. | 5 | 164 | .....................................EDFMAAHDNATRKIEAIHEKERAAEQRRWEIERREREQQRQLQRKKDAEDFIANKSKFFGLVIDEYYNEGKTQGICVFGSGYYKKATLILSARIGDEIIETVEEVVQCHGKHNQDTEYHERIIDLVNKNANLIRERMKA..... | 322 |
8 | -3.630 | PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815; | ali follow.. | 10 | 314 | ..................................KNLVIAHDNAVKLLYQMKHEVEEQQYKVRFEKIKDLEKTIDNYAKQASDLLTEGKALSHCVGGSNY--IKQHIEGKTTIIFVRDKQDLEKSLYTLEYKNGQIYQLR----GKHNCDPTKDVQMAANKWAKLLKSKTKVLQN...... | 452 |
9 | -3.380 | PB021443 Q5LG43_BACFN/1-226 PB021443; Pfam-B_21443; | ali follow.. | 13 | 4 | ..................MKFILACVLLLSPLLCQAQKNLFNKYND--KGVSSVYISKAMMELNPNLFMKDLYIGKVAEHLNSVQKDIRSLVQSSKYELLMKQKSTVSGSEVELIMVMNGASSLKFVYMEGD----MTTDDIKKLMLYQSTSQNFIISGDLFYANNKPVTYFKKGNSDN.. | 183 |
10 | -2.920 | HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455; | ali follow.. | 11 | 21 | ...................................................................DHNETYADQRDRELDSINAFLRN--ENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVLFESNGIYMQVINDGCGDYIAKGKTQNVL...................... | 110 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10. |