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current user: public |
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Query: PB012108 A3U600_9FLAO/1-189 PB012108; Pfam-B_12108;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . | |||||||
# | Score | Template | Links and tools | %id | First | MLSLLLIEYNSITKRFLSGNIENSIFVNQQNAMAKKEKKQLKKRLLHKYRMVILNEDTFEERVSLKLTRLNVFILVTLTSLLLIAGTTVLIAFTPLKEYIPGYSSTSLKLKATELTYKTDSLETALAINNQYYESIKKVLSGDVKSTDIDKDSILEAARISIDSINLSPSEEDLKLREKVALEDKYNVF | Last |
1 | -110.000 | PB012108 A3U600_9FLAO/1-189 PB012108; Pfam-B_12108; | ali | 100 | 1 | MLSLLLIEYNSITKRFLSGNIENSIFVNQQNAMAKKEKKQLKKRLLHKYRMVILNEDTFEERVSLKLTRLNVFILVTLTSLLLIAGTTVLIAFTPLKEYIPGYSSTSLKLKATELTYKTDSLETALAINNQYYESIKKVLSGDVKSTDIDKDSILEAARISIDSINLSPSEEDLKLREKVALEDKYNVF | 189 |
2 | -78.600 | PB067216 JCVI_PEP_1096676511767 /source_dna_id=JCVI_ORF_1096676511766 /offset=0 /translation_table=11 /length=256 /full_length=256 | ali follow.. | 46 | 2 | ...............................AKKAGKKERSQNKWRYKYRLVVLNEETFEEKVSFKLSRFNVFVVGTLSAVALIAATIVLVAFTSLREYIPGYASTDLRRQAVSLAEATDSLSQIISYNERYIERIRMVLKGDYAPSQIENDSLDLPFNLDTTTIALTPIREDSILRARVALEDRYNL. | 158 |
3 | -4.610 | HGC00993 gi|163626727|dbj|BABG01009540.1|1.0 TMP01352; | ali follow.. | 14 | 1 | MFSLLLSTFAMMGLTFVIGFFVAGVIKHQEELARLKRIRKLHQKVATLITESALSDEEYGSDGREDFSR----------------------HPGDNRGFYHGVSPGESERGLMDYFYPEDTRTMFLRKEEQMLQHDKK................................................... | 134 |
4 | -3.050 | PB015954 Q6WBB3_BIFBR/1-225 PB015954; Pfam-B_15954; | ali follow.. | 10 | 115 | .......QADVIVGYRADDSYFSFARTFVNNAISLDQLADAMRLGELGKQIVLISSRAFA-----------------------------ALQFQDCEIARASTYHVLRNERDVTAREAYRRKSAEADIDGLFMRDIEKVTNDD.............................................. | 223 |
5 | -2.990 | HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561; | ali follow.. | 27 | 13 | ...LLLIELLLIGKRKDEDDMAKSTKTYEERIRALEKKEQESIEATKKLRKELEKRKKAEE................................................................................................................................ | 76 |
6 | -2.740 | PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694; | ali follow.. | 10 | 1 | MLRRSVPKSIWRTPPRKRRKWRFTVWRRSWAATSKPPSGNLPKSGETRKQPTIKNEINEKRKMRMNLPKVKMLQVSKCLIGLAVMMLQSCDVADNLRDMLCGNWESVEGKPDVLIYKEGEAYKVTVFRRSGLRRKLK.................................................... | 138 |
7 | -2.650 | PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete) | ali follow.. | 12 | 34 | .................................................................................................................DGTINKAKLTKYLQLSSQQNEQVASICDYFQEQMKVANSSKKNSDQKVRNAVYGNLKLMKNTL-----TEKQYSDY | 104 |
8 | -2.470 | PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791; | ali follow.. | 9 | 16 | .......................................................................ILGSFLLNLLLVLLLIIYNTTTSNLKDLVKGTDGKNIESVLMQHIEKVEEAQVEVEKVHKRLDIINNRMSFCIQKVGMVRYNAFADMGSDLSSYALLDENNNGMIITGIYGRSETVTY | 138 |
9 | -2.350 | PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621; | ali follow.. | 15 | 4 | .......................................................................VKILFAMALVLTMCSAFSLKKGHSKTVYAFGIAASFTDTVVFTDIQILDSAEGFLTHRDLYSYQLKNYVEDN-------GLQQNSTCMIYFSENRKKLEKEATKILSKYKRNRNTTV. | 118 |
10 | -2.220 | HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234; | ali follow.. | 8 | 3 | .......................................................................................................KKKRGEERMKEEDNILKKVGKKFKVPEGYFENLTSEVMGKLPEKEGPAFE.................................... | 54 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |