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Query: PB012108 A3U600_9FLAO/1-189 PB012108; Pfam-B_12108;, from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLSLLLIEYNSITKRFLSGNIENSIFVNQQNAMAKKEKKQLKKRLLHKYRMVILNEDTFEERVSLKLTRLNVFILVTLTSLLLIAGTTVLIAFTPLKEYIPGYSSTSLKLKATELTYKTDSLETALAINNQYYESIKKVLSGDVKSTDIDKDSILEAARISIDSINLSPSEEDLKLREKVALEDKYNVFLast
1 -110.000PB012108 A3U600_9FLAO/1-189 PB012108; Pfam-B_12108;  ali  100  1MLSLLLIEYNSITKRFLSGNIENSIFVNQQNAMAKKEKKQLKKRLLHKYRMVILNEDTFEERVSLKLTRLNVFILVTLTSLLLIAGTTVLIAFTPLKEYIPGYSSTSLKLKATELTYKTDSLETALAINNQYYESIKKVLSGDVKSTDIDKDSILEAARISIDSINLSPSEEDLKLREKVALEDKYNVF 189
2 -78.600PB067216 JCVI_PEP_1096676511767 /source_dna_id=JCVI_ORF_1096676511766 /offset=0 /translation_table=11 /length=256 /full_length=256  ali follow..  46  2...............................AKKAGKKERSQNKWRYKYRLVVLNEETFEEKVSFKLSRFNVFVVGTLSAVALIAATIVLVAFTSLREYIPGYASTDLRRQAVSLAEATDSLSQIISYNERYIERIRMVLKGDYAPSQIENDSLDLPFNLDTTTIALTPIREDSILRARVALEDRYNL. 158
3 -4.610HGC00993 gi|163626727|dbj|BABG01009540.1|1.0 TMP01352;  ali follow..  14  1MFSLLLSTFAMMGLTFVIGFFVAGVIKHQEELARLKRIRKLHQKVATLITESALSDEEYGSDGREDFSR----------------------HPGDNRGFYHGVSPGESERGLMDYFYPEDTRTMFLRKEEQMLQHDKK................................................... 134
4 -3.050PB015954 Q6WBB3_BIFBR/1-225 PB015954; Pfam-B_15954;  ali follow..  10  115.......QADVIVGYRADDSYFSFARTFVNNAISLDQLADAMRLGELGKQIVLISSRAFA-----------------------------ALQFQDCEIARASTYHVLRNERDVTAREAYRRKSAEADIDGLFMRDIEKVTNDD.............................................. 223
5 -2.990HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;  ali follow..  27  13...LLLIELLLIGKRKDEDDMAKSTKTYEERIRALEKKEQESIEATKKLRKELEKRKKAEE................................................................................................................................ 76
6 -2.740PB008694 Q9F6U1_BACTN/1-190 PB008694; Pfam-B_8694;  ali follow..  10  1MLRRSVPKSIWRTPPRKRRKWRFTVWRRSWAATSKPPSGNLPKSGETRKQPTIKNEINEKRKMRMNLPKVKMLQVSKCLIGLAVMMLQSCDVADNLRDMLCGNWESVEGKPDVLIYKEGEAYKVTVFRRSGLRRKLK.................................................... 138
7 -2.650PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete)  ali follow..  12  34.................................................................................................................DGTINKAKLTKYLQLSSQQNEQVASICDYFQEQMKVANSSKKNSDQKVRNAVYGNLKLMKNTL-----TEKQYSDY 104
8 -2.470PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;  ali follow..  16.......................................................................ILGSFLLNLLLVLLLIIYNTTTSNLKDLVKGTDGKNIESVLMQHIEKVEEAQVEVEKVHKRLDIINNRMSFCIQKVGMVRYNAFADMGSDLSSYALLDENNNGMIITGIYGRSETVTY 138
9 -2.350PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621;  ali follow..  15  4.......................................................................VKILFAMALVLTMCSAFSLKKGHSKTVYAFGIAASFTDTVVFTDIQILDSAEGFLTHRDLYSYQLKNYVEDN-------GLQQNSTCMIYFSENRKKLEKEATKILSKYKRNRNTTV. 118
10 -2.220HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;  ali follow..  3.......................................................................................................KKKRGEERMKEEDNILKKVGKKFKVPEGYFENLTSEVMGKLPEKEGPAFE.................................... 54

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 1 1 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Dunbrack RL Jr, Dunker K, Godzik A. Protein structure prediction in biology and medicine. Pac Symp Biocomput. 2000;(12):93-4.