|
current user: public |
|
Query: PB014998 gi|86133284|ref|ZP_01051866.1| hypothetical protein MED152_01230 [Tenacibaculum sp. MED152]gi|85820147|gb|EAQ41294.1| hypothetical protein MED152_01230 [Polaribacter dokdonensis MED152], from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 | |||||||
# | Score | Template | Links and tools | %id | First | MSILKITEELQNLGNAGKDNRQRVANIVLENKELFEPLLEVTFQVDEPISVKAAWVLEWICTHHQLSWMIPHLTFFTENLKNLTFDSAIRPCAKICEHLANAYYSKRDNEFKSKLKNEHIQEIIETGFDWLITPQKIAVRAYTMNTLYLFGLENDWVHPELKHLIETKIIHESKGTKARGKHILNLIEKHQKS | Last |
1 | -71.000 | PB014998 gi|86133284|ref|ZP_01051866.1| hypothetical protein MED152_01230 [Tenacibaculum sp. MED152]gi|85820147|gb|EAQ41294.1| hypothetical protein MED152_01230 [Polaribacter dokdonensis MED152] | ali | 100 | 1 | MSILKITEELQNLGNAGKDNRQRVANIVLENKELFEPLLEVTFQVDEPISVKAAWVLEWICTHHQLSWMIPHLTFFTENLKNLTFDSAIRPCAKICEHLANAYYSKRDNEFKSKLKNEHIQEIIETGFDWLITPQKIAVRAYTMNTLYLFGLENDWVHPELKHLIETKIIHESKGTKARGKHILNLIEKHQKS | 193 |
2 | -3.390 | PB000795 Q74Z21_ASHGO/1-280 PB000795; Pfam-B_795; | ali follow.. | 6 | 204 | ...............................................................................................................................ADLVWPNWQARALYIDFWMLGDAARELPDARELGNLVMNMFDPEDVSTVDKCRKFLQKEFFDKYTD | 276 |
3 | -3.160 | PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete) | ali follow.. | 12 | 111 | ..........................................................................................................................VCEMFIDRVSASKNYQKEKYTDKSALEYYEKSVDIHPDTKAMLEYLLVMLSVKGEEYTYSYIKKEVLKGHI | 184 |
4 | -2.960 | PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217] | ali follow.. | 7 | 238 | .......PKIKVSTPDSNFKKPNLEDRFQPSDSLMTETLARVYVEQKNFS-KAKQAYRILSLKYPEK--SGFFADQIRAIEKLQEN........................................................................................................... | 313 |
5 | -2.500 | PB009510 _JGI.0345302_ 2004041369 [Human Gut Community Subject 8] | ali follow.. | 9 | 3 | ....................LSYVTPGFYDKSYVGKWMFQVMGLEYDKALKLAEELPEQFFPETATWGLCWHEIKW---LPVQENLSYQERRQAIYEKR----------DYHSPMTPYIMERYLENATGFIADCHDAGPLKYKPPHPNVFKAFFNGDGTLDSKKVRKLIDKLKES.................. | 148 |
6 | -2.400 | PB006101 JCVI_PEP_1096697844517 /source_dna_id=JCVI_ORF_1096697844516 /offset=0 /translation_table=11 /length=371 /full_length=371 | ali follow.. | 11 | 37 | ........................................LIVMDSTKFKGKIGRELVDIYSSYISGLPQPEPRYDLRYIKPRKFNSILKHAKNIVVAFSLEGNSLDSEILRRNFNSESLDKIQSDSSLFYFVRRNQYARGQVVLYLF--SENDDDLYSKIKRNRNSILKFFDDELKKRVDTEIFRKVENN.. | 185 |
7 | -2.380 | PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483] | ali follow.. | 10 | 184 | NTGTGILQNIMDSDGTGEAEADTLSTAIGSDHGHWSDTLRKAFDHDRLSYNRRTDQEYREVKKSYLSVLISGTPSQVQTFIPTAEDGSYSRQ--LYYYMCGISKWISQFMDNEIDWEEIFTAMGLEWKEKLSVIKTHGIHTLQLT---EQKEEIDTVFSDLFERSSVANGREMYSFVARLAVNLCRI...... | 369 |
8 | -2.070 | HGC00150 gi|162733542|dbj|BAAZ01030454.1|1.0 TMP01074; | ali follow.. | 9 | 15 | IDELGLSAQAARNLYAGKAN-AQVVNYLLESPRFFNDTVAAGYAAQNQLYTTISSLTRKTVKTEAGEQAARDIAHLRTSVYQADLVTIENQFMLAVKEV------KKEIGNDFAAMQSMTAEAAKRMFTEVAKGQDMTNPTITPEQVSDL-DALNTLGQALTGFFQNHLRAAQYR-RQDNEQLCALAQKGTQS | 226 |
9 | -1.790 | HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167; | ali follow.. | 8 | 40 | ....SVDAEFSSRWVYPEEEIKKLVESLEDKDKVYIKILTYEFEDEYRIFSQGEWKVKLVTE................................................................................................................................... | 100 |
10 | -1.770 | PB034883 _HOMD.0130261_ bfor_c_1_4664 Tannerella forsythia ATCC 43037 [1809083 - 1810348] ORF | ali follow.. | 5 | 129 | ...........................................................................................................................................................NFIGYFREAMYKRHKNSSTSILVNWKRAMDFLKMYAGE | 166 |
FFAS is supported by the NIH grant R01-GM087218-01
|
![]() ![]() ![]() ![]() ![]() ![]() |
Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Alonso A, Rahmouni S, Williams S, van Stipdonk M, Jaroszewski L, Godzik A, Abraham RT, Schoenberger SP, Mustelin T. Tyrosine phosphorylation of VHR phosphatase by ZAP-70. Nat Immunol. 2003 Jan;4(1):44-8. Epub 2002 Nov 25. |