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current user: public |
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Query: PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . | |||||||
# | Score | Template | Links and tools | %id | First | MSETKERLCIYADFPYEFAVCAPRTDCPKREQCLRASAYDGVLARGLQKITVINPLIPTSEQGCKAFADNTPVLFAHGITHLYDELPHHAVQSLKHRLLTYFGKTTYYRIYRKERYITIQEQDYIRDSFVRAGFSSDLIRYDAMVYMYELQSAMVKS | Last |
1 | -91.900 | PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258; | ali | 100 | 1 | MSETKERLCIYADFPYEFAVCAPRTDCPKREQCLRASAYDGVLARGLQKITVINPLIPTSEQGCKAFADNTPVLFAHGITHLYDELPHHAVQSLKHRLLTYFGKTTYYRIYRKERYITIQEQDYIRDSFVRAGFSSDLIRYDAMVYMYELQSAMVKS | 157 |
2 | -5.030 | PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete) | ali follow.. | 10 | 137 | .........................................................................................................EYYEKSVDHYMIHPDTKAMLEYLLVMLSVKGEEYTYSYIKKEVLKGHI.... | 184 |
3 | -4.960 | PB008434 gi|121582878|ref|YP_973320.1| hypothetical protein Pnap_4296 [Polaromonas naphthalenivorans CJ2]gi|120596140|gb|ABM39578.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2] | ali follow.. | 10 | 153 | .KETKLYQAPFFNVWSQGKVCTGNAAMPVGDN--------------AAIPHMWVDAFFGSNFTHPNFKEKDRLVKGVCPIDFWKAMTEKPLPVFPEGRLVDLPLT--------ADLLAPDLNQKLGNIDRAAG........................ | 263 |
4 | -3.350 | HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348; | ali follow.. | 20 | 94 | ...............KGVATCG---DCLDLERCPTVGEILENNPSALKNLKG......................................................................................................... | 127 |
5 | -2.590 | PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119; | ali follow.. | 6 | 245 | .......NFDLNNLPIENGLLTVEAIWFLQSKMELTDTATVIIINNTAYVNINKNSVKHNNFAVNYLKSEENNWYLTGLGLFVEKFFKDDVEVFSPKIPAL-----YFVVNNSTK-----------NIFSSVGISSLSTNNPKLIFTFTFDN..... | 378 |
6 | -2.590 | PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498; | ali follow.. | 9 | 28 | ..KRRAAEAKGESLPEEPVRVVPPGCCGMHITCEK------------------DSLLTAVSKSIVYYDDEELDRYAGVLPEEYNTEAVEEFEEILSTLQEEEVPSWIRSLQMRQIQMPISIKEQALFIVSE.......................... | 138 |
7 | -2.590 | HGC00789 gi|163310627|dbj|BABD01000073.1|7.0 TMP01036; | ali follow.. | 11 | 11 | ......................................................................................TLKTKDMIAKTILQQIGGKRFTAMTGSRDFIDMGNGLRMSLARNKTSANRLDIIYDEGADLYN........ | 73 |
8 | -2.470 | PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361; | ali follow.. | 9 | 1 | MKIERLFIYCLLAGTSLLASCNSEDM-SEGMYPLTFTAMQGEVVATPQTRVSDYDDTDGKHKS---WDGGEVI----GVKIGTDGAVGSYTLDSDGKPTTSTSNIPAYWQSTASQTVYPGQDNTGNKFPYVLKGVSSKQYSYKENVQLNLEHQLVK. | 168 |
9 | -2.450 | PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890; | ali follow.. | 13 | 8 | ..............PWGRFGCYL--ACPMKKEFIGRTAKSLSLALAIFSGCIFGSVLPAWSQEI----------VAGELERCFLAMPESVLPIVRNDLCRRAGNRNFIRIQTSTRILPFSDSSSVICVVTTVLHPVADSRIDFYTTEWK........ | 172 |
10 | -2.420 | PB048631 gi|160885545|ref|ZP_02066548.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]gi|156109167|gb|EDO10912.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483] | ali follow.. | 7 | 1 | ....MKIKF-LSFIASFFMVSFVITSCLDDDNNIEYSPDATIHAFALDTAGLGSYKFTIDQLSREIYNEDS-LPVHADTIIDKILIKTLTTASGVVTMKDKSGNDSVININDSTIKVWSTEALAGISPNQTKEYTIKVNVHQHDPDSLRWNH..... | 153 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Alonso A, Rahmouni S, Williams S, van Stipdonk M, Jaroszewski L, Godzik A, Abraham RT, Schoenberger SP, Mustelin T. Tyrosine phosphorylation of VHR phosphatase by ZAP-70. Nat Immunol. 2003 Jan;4(1):44-8. Epub 2002 Nov 25. |