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Query: PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 | |||||||
# | Score | Template | Links and tools | %id | First | MKREAQNYIDNKLKPPKAFFEWCFSQIPTYKWSNKKETILASNRKNCSVIEQKLRKNSRLTFFGKLNVFGIVLVTSKRIEIQSYAFWNRVVEGKEIIEFDLVNFEQFAEGEHVKVASSDGKMWFGLIPVYGGMSGGPYSMIQLFENDWKEKIRSKSELKYLEIPHLDFKEIETIYKYRVEIEFLQKIKARQLAKEVMYPVTQYTNGSFRKTVDMRTINSKWLKENKPFFKNSDRGFMEFELARRIQKRRGKVVSGIEKYLDYRAINKIPEGVGIVRFQNWIIKNKVDFSYYLDYLNLMRDLNIAIDSENIIMPKNLVIAHDNAVKLLYQMKHEVEEQQYKVRFEKIKDLEKTIDNYAFIVPKQASDLLTEGKALSHCVGGSNYIKQHIEGKTTIIFVRDKQDLEKSLYTLEYKNGQIYQLRGKHNCDPTKDVQMAANKWAKLLKSKTKVLQN | Last |
1 | -127.000 | PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815; | ali | 100 | 1 | MKREAQNYIDNKLKPPKAFFEWCFSQIPTYKWSNKKETILASNRKNCSVIEQKLRKNSRLTFFGKLNVFGIVLVTSKRIEIQSYAFWNRVVEGKEIIEFDLVNFEQFAEGEHVKVASSDGKMWFGLIPVYGGMSGGPYSMIQLFENDWKEKIRSKSELKYLEIPHLDFKEIETIYKYRVEIEFLQKIKARQLAKEVMYPVTQYTNGSFRKTVDMRTINSKWLKENKPFFKNSDRGFMEFELARRIQKRRGKVVSGIEKYLDYRAINKIPEGVGIVRFQNWIIKNKVDFSYYLDYLNLMRDLNIAIDSENIIMPKNLVIAHDNAVKLLYQMKHEVEEQQYKVRFEKIKDLEKTIDNYAFIVPKQASDLLTEGKALSHCVGGSNYIKQHIEGKTTIIFVRDKQDLEKSLYTLEYKNGQIYQLRGKHNCDPTKDVQMAANKWAKLLKSKTKVLQN | 452 |
2 | -51.100 | PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946; | ali follow.. | 19 | 116 | .........................................................................................................................................................................................................................................................................RTADECWASYLIAKRHKYQIDNLSMWCDYLRMLKKLGQDLRNPKNICPEDFMAAHDNATRKIEAIHEKERAAEQRRWEIERRGLVITDEEIIVKVLESIDEYYNEGKTQGICVF--GS-GYYKKADTLILSARI-GDEIIETVEVDLRTLEVVQCHGKHNQEYHERIIDLVNKNANLIRERMKA... | 322 |
3 | -4.660 | PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF | ali follow.. | 11 | 6 | ................................................................................................................................................................................................................................................................................................................................................................ASVLNLINPEDIESQ----TILKDAAATALYGSRGANG--VVLITTKSGRRGKTHIAFTAEYG---------SDFATPHALDYMDA--QYAQYTWESLKN | 90 |
4 | -4.050 | PB025553 _HOMD.0078651_ pint_c_1_4510 Prevotella intermedia 17 [1755134 - 1755736] ORF | ali follow.. | 11 | 2 | ........................................................................................................................................................................................................................................................................................FVAKELRKKSIAEYLLYMWQIEDIIRVYGC----SLTRIRKEYIDKFDYTDEQKEEEEFGDLVRMMNQEGCRENGHLQINKVVMQALTELHTQLLASSKFPFYSAEYYRVLPFIVELRGKTKQVADRMAVELYGVMMLRLQKKEISRETETAVKEITTLIGMLSDYYQKDKT | 194 |
5 | -3.890 | PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759] | ali follow.. | 13 | 112 | ...................................................................................................................................................................................................................................................................................................................................................................VQIKLAPVNAPYFDGAKLLADCTA-ASFHEKFIKGHVTLIGCPKLDSVDEKLTEIDIQSVTIVRM----EVPCCGGLEMAAKKALQDSGKFIPWQV. | 213 |
6 | -3.610 | PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791; | ali follow.. | 10 | 35 | .........................................................................................................................................................................................................................................................................................................................TTTSNLKDKYKRLVKGTDGKNIESVLMQHIEKVEEAQVEVEKVH----KRLDIINNRMSFCIQKVGMVRYFADMGSDLSYSYALLDENNNGMIITGIYGRSETVTYAKGKSNYSLSVEELQALQRAKENTIDTLELQGF | 175 |
7 | -3.350 | PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645; | ali follow.. | 11 | 80 | ............................................................................................................................................................................................................................................................................................................................KEVFKPASDDKPKESIQDYEQEYENQLKDILETIIGVEDVSIVV-ATSLKIFEKNRKTQE--GGKRTVSEMSSDEEIV--IIKNGDKETPVVVQTKKRGVLVVAQGVDNVQIKKTIIEAVTR-VPSHRVAVAPKKM | 227 |
8 | -3.180 | PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361; | ali follow.. | 8 | 1 | MKIERLFIY-----AGTSLLASCNSE----DMTDNPVETLSEGMYPLTFTEVVATPQTRVSDYDDTDGKHKSKDGGEVIGVKI-VGSYTLDSDGKPTTSTSNIPAYWQSTASQTVYGWY--NTADISLTGQDNTGNKFPYVLKGVSSKQYSYKENVQLNLEH--------------QLVKFRVKLNGDVPNLSDAKVFFYGYPTCKNEYGTVIPQGDKTYLATRKVGDYYTAMLAPDTKTSNNFVKIEVYGLTYYYNPDIELVKGTVYTYTVNKVDIPYEIIDNNGNSVSGFENISKDISISGTHIPGLTITGTCTVTMNSAAISANGKPGISVEQDNSILSNDSAGILVRKNASVIIKTTASDSKLTVKASNDTPGIGVAEMNTEC--NKIDI-TLDVTGGGYAAAISITIKNSVITACSGKGAAAIGT...................... | 446 |
9 | -2.990 | PB046158 _JGI.0336690_ 2004028347 [Human Gut Community Subject 8] | ali follow.. | 13 | 75 | .........................................................................................................................................................................................................................................................................................................................................................................QTIKQLNAQGVQLSN-ITDENIFDRVARKYGIDYSLKKEVGADPPKYLVFFKAKDV------------DVMTAAFREYAGVELKKKQVKKP | 156 |
10 | -2.970 | PB021443 Q5LG43_BACFN/1-226 PB021443; Pfam-B_21443; | ali follow.. | 10 | 49 | ................................................................................................................................................................................................................................................................................................................................................PNLFMKDLYIGKVAEHLNSVQVLSTHDNKVREEMAKDIRSLVQSSKYELLMKTVSGSEVYVNRKGSKVKELIMVMNGASSFVYMEGDMT---TDDIKKLMLYQSTSQNFIISGDLF | 166 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Shiryaev SA, Ratnikov BI, Chekanov AV, Sikora S, Rozanov DV, Godzik A,Wang J, Smith JW, Huang Z, Lindberg I, Samuel MA, Diamond MS, Strongin AY. Cleavage targets and the D-arginine-based inhibitors of the West Nile virus NS3 processing proteinase. Biochem J. 2006 Jan 15;393(Pt 2):503-11. |