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current user: public |
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Query: PB027778 Q5LHJ0_BACFN/1-110 PB027778; Pfam-B_27778;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 | |||||||
# | Score | Template | Links and tools | %id | First | MGLEDDFLLNDADDEKTIEFIRNYLPQELKEKFSEDELYYFLDLIDEYYSESGILDVQPDADGYVDIDLEQVVEFIVKEAKKDEVGEYDPEDILFVVQGEMEYGNSLGQV | Last |
1 | -59.000 | PB027778 Q5LHJ0_BACFN/1-110 PB027778; Pfam-B_27778; | ali | 100 | 1 | MGLEDDFLLNDADDEKTIEFIRNYLPQELKEKFSEDELYYFLDLIDEYYSESGILDVQPDADGYVDIDLEQVVEFIVKEAKKDEVGEYDPEDILFVVQGEMEYGNSLGQV | 110 |
2 | -7.720 | PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821; | ali follow.. | 10 | 81 | LSRLLHLVASSVDGSRDIETIAHRVSGRFGREVSADNVRYLIE---QKLDPLGVTVPEGREEEDISAPRSDLLLALKGHR------VIFNERRVATIAGALAWL...... | 175 |
3 | -6.650 | PB036876 Q56VH6_BACFR/1-141 PB036876; Pfam-B_36876; | ali follow.. | 18 | 37 | ..............DDCVTYILNYVQKSGCNGFTDGEI---YGQAVHYYDENEIEVGKPIQCQVAVNHVVELTAEEKAEARQNAIRQYQDEE.................. | 111 |
4 | -5.350 | PB007740 Q89YT2_BACTN/1-193 PB007740; Pfam-B_7740; | ali follow.. | 10 | 41 | .............MQMQTNQMVRAL------MLDDATAAKFTPIYEKYLKEPVMTDAEIAKMLKDQFAQSRKMLDIREKYYNEFSKILSQKQIMKIYQQEKSNMNKF... | 159 |
5 | -3.760 | PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152 | ali follow.. | 5 | 83 | ............PADELEAYFFDVFQDYDEERVYPSDIKKIIQW-YNILAEKVPQVFKAETAEEESQEEVAV...................................... | 141 |
6 | -3.370 | PB011130 gi|88806557|ref|ZP_01122074.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501]gi|88783389|gb|EAR14561.1| hypothetical protein RB2501_00756 [Robiginitalea biformata HTCC2501] | ali follow.. | 13 | 17 | ..................................DENAYQKLL---RYLEAVKRSFAGTAGSDEIIADIEARIAELFYEKMENERQVITQKEVDAVIA............ | 77 |
7 | -3.030 | PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete) | ali follow.. | 7 | 32 | ..............KWDGTINKAKLTKYLQ--LSSQQNEQVASICDYFQEQMKVANSSKKN----------------SDQKVRNAVYGNLKLMKNTLTEK.......... | 99 |
8 | -2.980 | HGC00962 gi|162759780|dbj|BAAZ01005693.1|3.0 TMP01305; | ali follow.. | 13 | 70 | ..............EKALRQYCGRLHAERTGAYLPRALQGVLEGTLGVFGER--LAVEHNMTNHLLGGDMDMTRDEYSKMRGSSVREVSATHGTISFKDVMVFYKE.... | 166 |
9 | -2.920 | PB062605 Q9F6T7_BACTN/1-105 PB062605; Pfam-B_62605; | ali follow.. | 10 | 27 | ..............VERLKGYLDGLPPETCRRIV---MLAAFAVLALYTFGRAAYDIGRNDGSRMETGHAGRVELPTPAETDNHLTPYL..................... | 100 |
10 | -2.770 | PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890; | ali follow.. | 8 | 67 | ...............GELERCFLAMPESVLPIVTMEERNDLCRRAGHLSGFTHTASLESSLGGTVTFLNRNFIRIQTSTVGEVFMRILPFSDSSSVI............. | 149 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |