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Query: PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92], from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 | |||||||
# | Score | Template | Links and tools | %id | First | FYIDKGGPEAHFKRYIKEHVKGKKTGLFITLGADPAGEHGESMLKVGRELLNEGGNEILAEFICQGAIDPKVIEEMKEMAAKMGDKAIHLITPERQATWKQASTHPDENDLKNARKAFEG | Last |
1 | -68.600 | PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92] | ali | 100 | 1 | FYIDKGGPEAHFKRYIKEHVKGKKTGLFITLGADPAGEHGESMLKVGRELLNEGGNEILAEFICQGAIDPKVIEEMKEMAAKMGDKAIHLITPERQATWKQASTHPDENDLKNARKAFEG | 120 |
2 | -3.950 | HGC00962 gi|162759780|dbj|BAAZ01005693.1|3.0 TMP01305; | ali follow.. | 10 | 63 | .........PIRNEFAEKALR----QYCGRLHAERTGAYLPRALQGVLEGTLGVFGERLGRLLLKLAVEHNMTNHLLGGDMDMTRDEYSKMRGSSVREVSATHGTISFKDVMVFYK.... | 165 |
3 | -2.890 | PB009671 Q5LCM2_BACFN/1-111 PB009671; Pfam-B_9671; | ali follow.. | 9 | 44 | ..ITVKELPQVVKSTLSKDYEGTIVKEAFVAEKENGKVYKIIVTAIKED---QSTEEITVLLNEKGEP.................................................... | 106 |
4 | -2.860 | HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178; | ali follow.. | 15 | 26 | ...HKLKRLENRKKYLEKGERQKRTHRLCNLGG-----TIESLAPEFKDLTRTEMTELMEYIFSLPEVQRAVRHMAITHINQASRGK-----EQKADGNIPLHRHPDQTQ.......... | 122 |
5 | -2.780 | PB000716 Q60CS7_METCA/1-294 PB000716; Pfam-B_716; | ali follow.. | 10 | 27 | YWSAR-----ELQPLLG----------------YSQWRRFEQAIERAITSCKESGNSPEHHFA---------AGKPITGGKGAVQVVDDYHLSRFACYLIAQNGDPRKPEIAQAQKYF.. | 115 |
6 | -2.550 | PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete) | ali follow.. | 8 | 330 | ........GKAMNDHLTKIITQKYIAQMPYQVLEIWNDHRRLGLPFFEIPANESDLIGSDMVNVLKKDSWKNGQQWDFYPQRMRYPTTLDNADP--ENYQKAVELLGGSDVIITPLW... | 436 |
7 | -2.550 | PB162065 _Gut.Meta.Jp.0089312_ gi|162832207|dbj|BABA01012502.1||1 (- 0:1326~0 complete) | ali follow.. | 15 | 125 | ...VPPEMDRQFLEAIKEVSARRMITYYLMGEGFSGAESGKSWMNLSLKQLCAMKRHVFQNLYARGA..................................................... | 191 |
8 | -2.480 | PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346; | ali follow.. | 15 | 125 | ............HVRLEHHLSHPGIRTLLHKAGYKDDADCEGMLLELRSRIGGNNS--IGLFI--GYPAKDVAAFMG........................................... | 189 |
9 | -2.470 | PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621; | ali follow.. | 4 | 17 | ...........CSAFSLKKGHSKTVYAFGIAASFTDTVVYFTDIQILDSAKVSKEGFLTH............................................................ | 65 |
10 | -2.280 | PB007011 gi|160888195|ref|ZP_02069198.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]gi|156862330|gb|EDO55761.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492] | ali follow.. | 12 | 4 | ................EDSRHSKYVIRIICEGEKTEPLFFTSLCDKLLD....................................................................... | 36 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Grynberg M, Erlandsen H, Godzik A. HEPN: a common domain in bacterial drug resistance and human neurodegenerative proteins. Trends Biochem Sci. 2003 May;28(5):224-6. Review. |