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current user: public |
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Query: PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 | |||||||
# | Score | Template | Links and tools | %id | First | MSNIEQAYRGYGFAGRGQKNGCTVYQLKGEGGSGEMVCYDIAPGIQMSFNQLTMDSTFQSIAPVKKFLQIDYCIEGCYEVEYQNGTVSFLGEGDLCVTDLSRQVFVSSRLPLRKYRGVTLFLEVEKAQHTLSAGFPQAEINLAGIVNELCGKEQSLLVKSREDVERIFGKLSEVDERIQAPYYWIKTMEL | Last |
1 | -86.200 | PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276; | ali | 100 | 1 | MSNIEQAYRGYGFAGRGQKNGCTVYQLKGEGGSGEMVCYDIAPGIQMSFNQLTMDSTFQSIAPVKKFLQIDYCIEGCYEVEYQNGTVSFLGEGDLCVTDLSRQVFVSSRLPLRKYRGVTLFLEVEKAQHTLSAGFPQAEINLAGIVNELCGKEQSLLVKSREDVERIFGKLSEVDERIQAPYYWIKTMEL | 190 |
2 | -3.980 | PB004476 gi|139436894|ref|ZP_01771054.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]gi|133776541|gb|EBA40361.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986] | ali follow.. | 4 | 157 | .KKFEKDLGAAIDEFNEGRSGTFEANSSYDEQAGKFTVEKARSNEKLNREHV-IKYAELELASLAETVDLS-FLGVNVTLKLNGEDAGKVDGSSVLQWISFADP-------------ANPTLDTSQISSWAAELANGFNTVGSTRWWTRADGKQCAVIDSSSLAKQVEDAINNKQTGEIEIKYSQK.... | 362 |
3 | -3.690 | PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg] | ali follow.. | 11 | 3 | ..........................................CGAKVSLEILNYAEFASVTELYTD--------KGCVSIT--------IGLGDIHIRAVKDGFFAEAMGHVRTQEEITLILNDNLLSK------DWVTDSWEMCEVEAPKDSVKYQFNLTREQQATNRSKLREAKLLRENRIE...... | 123 |
4 | -3.670 | HGC00787 gi|162657578|dbj|BAAX01002027.1|2.0 TMP01033; | ali follow.. | 8 | 1 | MEQTSIQALLQQRTLLQIEYYTEKEAFRKQTEQMGMQRKV-KRGDAWFPLRIGKSFYNSL---NQNAIEVFRTEDQDIEHNFEFGRPVMFFKAGETKTAQTDGKTEKKMLKYFSFTGTVSYVDGDRMVITVPDSAPLLELQQADVPVGVQ------LSFDETSYKMMFDALDRTMKAKNNRLAYLRDLFY | 181 |
5 | -3.430 | PB002770 Q744K2_MYCPA/1-559 PB002770; Pfam-B_2770; | ali follow.. | 8 | 108 | ...................PGGAGCVIAEDHGAGEVDSI-----------------LTRDGGNLRAIGNIRVELDGQTVLDTPVQSLVDGQLGALVANAGESPGGDYIKVPMPYRRSMRISVESHLEYYHVDYRQFPTAEGVSTFSPADPAVDVLDRFRAAGTVDP........................ | 243 |
6 | -3.220 | HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907; | ali follow.. | 12 | 27 | ...........................SDERGAGTVLVVGVIAVLLAAALGVSGLIQAQAAAGRSRAAADLAALGGATALSSIVA------PGDPCEAASRVARANGAEVTTCSVTGEDVVVEVSV................................................................ | 119 |
7 | -3.060 | HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167; | ali follow.. | 34 | 53 | ....................................................................................................................................................................EEEIKKLVESLEDKDKVYIKILTYEF | 78 |
8 | -2.480 | PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151; | ali follow.. | 8 | 1 | ...MATQAIDATIFASSHPDIAKRTSISGLL----ISCVMLLIGILSFASTFELEDKSSTVSMALMVFGTGLFLLGIFRLFWKSKEVVYVPTG-------------------SIAKERSIFFDLKHMDK-LTDLVNSGSFSADSKIKSEASGNIRMDVILSADNKFAAVQLFQFVPYTYQPVTAVHYFT. | 162 |
9 | -2.380 | PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete) | ali follow.. | 6 | 225 | ..........................................ARIYFAPWESY-------------FLLAEAAEYG---WISNITPKEAYELGRSSFEYFGVSEYADQYINSTTRNRLGTSVAFDDTVEPTSEVMTNTDQIQEVVYNYPTASKTLYGKAMNDHLTKIITQIAQMPYQVLEIWNDHRRLGL | 365 |
10 | -2.320 | PB144506 _Gut.Meta.Jp.0101058_ gi|162866171|dbj|BABB01003836.1||1 (- 121:946~0 complete) | ali follow.. | 11 | 129 | ...............................GPMDFEAQNAFSEDQLEIKISGSSDVKFPHNVKLRLGEFSVSGSGDLVLDCKNLTSKVSGSGDITLKGKADEARYSV.................................................................................. | 208 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Lukasz Jaroszewski, Zhanwen Li, S. Sri Krishna, Constantina Bakolitsa, John Wooley, Ashley M. Deacon, Ian A. Wilson, Adam Godzik, Exploration of Uncharted Regions of the Protein Universe. Plos Biology. 2009 Sep. 7(9):e1000205 |