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Query: PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276;, from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSNIEQAYRGYGFAGRGQKNGCTVYQLKGEGGSGEMVCYDIAPGIQMSFNQLTMDSTFQSIAPVKKFLQIDYCIEGCYEVEYQNGTVSFLGEGDLCVTDLSRQVFVSSRLPLRKYRGVTLFLEVEKAQHTLSAGFPQAEINLAGIVNELCGKEQSLLVKSREDVERIFGKLSEVDERIQAPYYWIKTMELLast
1 -86.200PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276;  ali  100  1MSNIEQAYRGYGFAGRGQKNGCTVYQLKGEGGSGEMVCYDIAPGIQMSFNQLTMDSTFQSIAPVKKFLQIDYCIEGCYEVEYQNGTVSFLGEGDLCVTDLSRQVFVSSRLPLRKYRGVTLFLEVEKAQHTLSAGFPQAEINLAGIVNELCGKEQSLLVKSREDVERIFGKLSEVDERIQAPYYWIKTMEL 190
2 -3.980PB004476 gi|139436894|ref|ZP_01771054.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]gi|133776541|gb|EBA40361.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]  ali follow..  157.KKFEKDLGAAIDEFNEGRSGTFEANSSYDEQAGKFTVEKARSNEKLNREHV-IKYAELELASLAETVDLS-FLGVNVTLKLNGEDAGKVDGSSVLQWISFADP-------------ANPTLDTSQISSWAAELANGFNTVGSTRWWTRADGKQCAVIDSSSLAKQVEDAINNKQTGEIEIKYSQK.... 362
3 -3.690PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]  ali follow..  11  3..........................................CGAKVSLEILNYAEFASVTELYTD--------KGCVSIT--------IGLGDIHIRAVKDGFFAEAMGHVRTQEEITLILNDNLLSK------DWVTDSWEMCEVEAPKDSVKYQFNLTREQQATNRSKLREAKLLRENRIE...... 123
4 -3.670HGC00787 gi|162657578|dbj|BAAX01002027.1|2.0 TMP01033;  ali follow..  1MEQTSIQALLQQRTLLQIEYYTEKEAFRKQTEQMGMQRKV-KRGDAWFPLRIGKSFYNSL---NQNAIEVFRTEDQDIEHNFEFGRPVMFFKAGETKTAQTDGKTEKKMLKYFSFTGTVSYVDGDRMVITVPDSAPLLELQQADVPVGVQ------LSFDETSYKMMFDALDRTMKAKNNRLAYLRDLFY 181
5 -3.430PB002770 Q744K2_MYCPA/1-559 PB002770; Pfam-B_2770;  ali follow..  108...................PGGAGCVIAEDHGAGEVDSI-----------------LTRDGGNLRAIGNIRVELDGQTVLDTPVQSLVDGQLGALVANAGESPGGDYIKVPMPYRRSMRISVESHLEYYHVDYRQFPTAEGVSTFSPADPAVDVLDRFRAAGTVDP........................ 243
6 -3.220HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907;  ali follow..  12  27...........................SDERGAGTVLVVGVIAVLLAAALGVSGLIQAQAAAGRSRAAADLAALGGATALSSIVA------PGDPCEAASRVARANGAEVTTCSVTGEDVVVEVSV................................................................ 119
7 -3.060HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167;  ali follow..  34  53....................................................................................................................................................................EEEIKKLVESLEDKDKVYIKILTYEF 78
8 -2.480PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;  ali follow..  1...MATQAIDATIFASSHPDIAKRTSISGLL----ISCVMLLIGILSFASTFELEDKSSTVSMALMVFGTGLFLLGIFRLFWKSKEVVYVPTG-------------------SIAKERSIFFDLKHMDK-LTDLVNSGSFSADSKIKSEASGNIRMDVILSADNKFAAVQLFQFVPYTYQPVTAVHYFT. 162
9 -2.380PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete)  ali follow..  225..........................................ARIYFAPWESY-------------FLLAEAAEYG---WISNITPKEAYELGRSSFEYFGVSEYADQYINSTTRNRLGTSVAFDDTVEPTSEVMTNTDQIQEVVYNYPTASKTLYGKAMNDHLTKIITQIAQMPYQVLEIWNDHRRLGL 365
10 -2.320PB144506 _Gut.Meta.Jp.0101058_ gi|162866171|dbj|BABB01003836.1||1 (- 121:946~0 complete)  ali follow..  11  129...............................GPMDFEAQNAFSEDQLEIKISGSSDVKFPHNVKLRLGEFSVSGSGDLVLDCKNLTSKVSGSGDITLKGKADEARYSV.................................................................................. 208

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 5 1 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Lukasz Jaroszewski, Zhanwen Li, S. Sri Krishna, Constantina Bakolitsa, John Wooley, Ashley M. Deacon, Ian A. Wilson, Adam Godzik, Exploration of Uncharted Regions of the Protein Universe. Plos Biology. 2009 Sep. 7(9):e1000205