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current user: public |
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Query: PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . | |||||||
# | Score | Template | Links and tools | %id | First | MATQAIDATIFASSHPDIAKRTSISGLLISCVMLLIGILSFASTFELEDKSSTVSMALMVFGTGLFLLGIFRLFWKSKEVVYVPTGSIAKERSIFFDLKHMDKLTDLVNSGSFSADSKIKSEASGNIRMDVILSADNKFAAVQLFQFVPYTYQPVTAVHYFTNDAAAAVAAFLTKSQL | Last |
1 | -104.000 | PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151; | ali | 100 | 1 | MATQAIDATIFASSHPDIAKRTSISGLLISCVMLLIGILSFASTFELEDKSSTVSMALMVFGTGLFLLGIFRLFWKSKEVVYVPTGSIAKERSIFFDLKHMDKLTDLVNSGSFSADSKIKSEASGNIRMDVILSADNKFAAVQLFQFVPYTYQPVTAVHYFTNDAAAAVAAFLTKSQL | 178 |
2 | -6.490 | PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7] | ali follow.. | 17 | 1 | ........ASYISVPRDLTK-LTKRQLICFGMAVLIGVPSFFLMKTVMKTNTAVMGMMVIMMPFFFLA-IQAIFQRPKIRPYVTDNYYAALLRQAKAEKEVEEIVRLSQKEKSGEKNIHNAGGVKQSRPDGSKGNRKK........................................ | 152 |
3 | -4.350 | PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520; | ali follow.. | 9 | 90 | .EKRLIIRQLPRLSRRTRFLMRALQAFYTSVALLVLTSILLGLDGLFDVNTGSLPLLVALGGSVSLAYGALLLS........................................................................................................ | 162 |
4 | -4.270 | PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF | ali follow.. | 18 | 5 | ...........................AIGGLLMAVGTGLYAFFIIQD-----VACIVMLIGAICFATM............................................................................................................. | 41 |
5 | -3.480 | PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473; | ali follow.. | 13 | 15 | ..............NKGAGNPLEFKGLKSQYLFILVAVLLVVVILYIAGVNQWICIPFGLLSGSLLVWLTFRL......................................................................................................... | 77 |
6 | -3.250 | PB011023 A7V2G7_BACUN/1-167 PB011023; Pfam-B_11023; | ali follow.. | 8 | 2 | ................NILNNKNKRTSIFKALALCLFAAVSFTFVSCDDD................................................................................................................................ | 35 |
7 | -3.180 | PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492] | ali follow.. | 16 | 1 | .......................MKKTIFYSLFSALFMLTSCSMFEIDNYEEPSET---IWGEV----------------VDEATGKRVL--------------TDQGSEGIRVRLTELSWGDNVQHNPDFYCMMDGTFQNTKIFEY............................... | 93 |
8 | -3.140 | PB069407 _HOMD.0084606_ pint_c_2_12 Prevotella intermedia 17 [3585 - 4295] ORF | ali follow.. | 20 | 1 | .................MNKRLNLYCTILLCIMSAVILYSFYAVSK.................................................................................................................................... | 29 |
9 | -3.050 | PB048420 Q64S71_BACFR/1-165 PB048420; Pfam-B_48420; | ali follow.. | 9 | 1 | ..........................................................MEIQFVIVRSENAEYLCHNVNGTYVDVSDPSTEFVSGEDDFRSSLTRKEYEFRGERFYLMPQFYGNGWLALTLQSVEDETEYIVLSVNLESMDALDLPDRTFIDVNHYPDAMEFLETNNL | 125 |
10 | -2.880 | PB023339 Q8A4U7_BACTN/1-171 PB023339; Pfam-B_23339; | ali follow.. | 13 | 45 | .............................................................................SKVIYRLDGSLYRHMKYDFTYDDQKRVTAKEAFKWDSSTEK-----IPYFKIDYAYSSNEITLVYARWNNSHRAYDDSVEKSVYELNDANMPIAYMN.... | 137 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |