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Query: PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401;, from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MDIGPCSIPTGEFLVGDPLVYLGSKYEKEYFQKIPTGEFRTEICVVKASDGDCDRYAAVRLKFNDNEISYFEEAMKGIEDLKDINEGDFFGFNVDAGLACICDKKLHDLYCEFDEKFVKENPDGNAYDDYFADLFKKSYEDNPKYQRDGGDWINWTIPGTDYHLPIFQSGFGDGAYPVYLAYDKDGNVCQLIVELIDIELAYSEIDEEDELast
1 -96.600PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401;  ali  100  1MDIGPCSIPTGEFLVGDPLVYLGSKYEKEYFQKIPTGEFRTEICVVKASDGDCDRYAAVRLKFNDNEISYFEEAMKGIEDLKDINEGDFFGFNVDAGLACICDKKLHDLYCEFDEKFVKENPDGNAYDDYFADLFKKSYEDNPKYQRDGGDWINWTIPGTDYHLPIFQSGFGDGAYPVYLAYDKDGNVCQLIVELIDIELAYSEIDEEDE 210
2 -4.160PB011023 A7V2G7_BACUN/1-167 PB011023; Pfam-B_11023;  ali follow..  89...GTLKMDNGITFLPNDRYLLENEKFRLYYTAQGDEAHNFIVVVEDNFGNSYELEFDFNNRNVKDD............................................................................................................................................... 152
3 -3.200PB017124 _Gut.Meta.Jp.0039711_ gi|162659581|dbj|BAAX01000024.1||2 (+ 385:1498~0 complete)  ali follow..  12  51VCLGAA---GGYITVAQPIKNGKGSDIRILGNAFYSANDPKY---GDATIGGSVEPGIVYVGVGSSPEITYYKPTVETGEIKTPYITIDNYIRWTASWTNPDGSKQTAEGWQPKNVYHKQSYWPAWEENDQITFRGARLPDNAVNYGGDGSDPDNPQYWVSYRYAADSYGYADATFDLDWAVDSDGNPKHL-ADFIRIQSGVLQQETSTE 292
4 -3.120PB023339 Q8A4U7_BACTN/1-171 PB023339; Pfam-B_23339;  ali follow..  1.............................MKTTVLFRMMVLVAMVVAGIANTELKAQDNNFITNEEKVDDLVVSKVIYRLDGSLYRHMKYDFTYDDQ----VTAKEAFKWDSSTEKWIPYFKIDYAYSSNEITLVYARWNNSHRAYDDSVEKSVYELNDANMPIAYMNYKWNDYKWAGNWAMNIQTPVTDEA.................. 165
5 -2.950HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473;  ali follow..  10  144LDCAVFPFPQA-LPIYDSALRKSLTTIEEVQSLMICDEVSVTKLLKYANPLSEN--SLMRGQITE................................................................................................................................................. 211
6 -2.950PB071107 _Gut.Meta.Jp.0066071_ gi|162701604|dbj|BAAY01026246.1||2 (+ 344:749~0 complete)  ali follow..  15  17LKQYAVETEEGSVVRIFPL............................................................................................................................................................................................... 35
7 -2.860HGC00690 gi|162868815|dbj|BABB01001192.1|3.0 TMP00870;  ali follow..  10  19..........................................................................................GAGVSAGVFAFVLVGVVPRILRCSRIENIILIENVMICGVVAGNISSVLDTAYNLGFANMPKVPVSNICGNIIIAIY--GLCVGIFV--------GCIAVALAEILHT............ 117
8 -2.660PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]  ali follow..  19  32...ETI---WGEVVTGKRVLTDQGSEGIRVNTKIFKGEYNVRILVRENTDGTLLHDGSVNTEISGTTKVKFEVQ........................................................................................................................................ 134
9 -2.550PB008806 Q5L9W8_BACFN/1-127 PB008806; Pfam-B_8806;  ali follow..  12  13.FISYGNLQTATMIIGTPLSIAESYVHKNMGEILQQTMSITQIRIKPTDKNK------LFLNINHINVSDWQSVRMKQRQKIVRVQSSNDSILLDFSKKVKFNAALNLAF.................................................................................................... 124
10 -2.350HGC01213 gi|163579070|dbj|BABE01006032.1|2.0 TMP01709;  ali follow..  11  148VDGSDLTITSGQETIYKSDVCPADSRLLLMAAKVNAGTYVAQLSLKDHPKVKSDPVTFT....................................................................................................................................................... 238

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.