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Query: PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete), from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKAIRHFITITHHKILVMQGCFRIGLYKQGLLHDMSKYSPTEFLVGCRYYKGYMSPNNAERADRGYSSAWLHHKGRNKHHLEYWIDYAVSKPGDDKTHTKMEGMKMPIRYVCEMFIDRVSASKNYQKEKYTDKSALEYYEKSVDHYMIHPDTKAMLEYLLVMLSVKGEEYTYSYIKKEVLKGHIPLast
1 -112.000PB047024 _Gut.Meta.Jp.0098985_ gi|162869273|dbj|BABB01000734.1||6 (+ 5047:5650~0 complete)  ali  100  1MKAIRHFITITHHKILVMQGCFRIGLYKQGLLHDMSKYSPTEFLVGCRYYKGYMSPNNAERADRGYSSAWLHHKGRNKHHLEYWIDYAVSKPGDDKTHTKMEGMKMPIRYVCEMFIDRVSASKNYQKEKYTDKSALEYYEKSVDHYMIHPDTKAMLEYLLVMLSVKGEEYTYSYIKKEVLKGHIP 185
2 -5.010PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;  ali follow..  10  106........................................................................................................................................TYYRIYRKERYITIQEQDYIRDSFVRAGFSSDLIRYDAMVYMYELQSA. 153
3 -4.760HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  4  30.........................................................................................................IQPDRMENILYDYHLSIEKHHITEAEFDSSMVWYTRHTEELSLYKKLGERFRSEKKHMQELLALRE.............. 118
4 -3.750PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete)  ali follow..  10  229..............................FAPWESYFLLAE--------AAEYGWISNITPKEAYELGIRSSF-------EYFGVSEYADQYINSTTRNRLGTSVAFDDTVEPTSEVMTYRDGYTNTDQIQEVVYNYPTASK--TLYGKAMNDHLTKIIAQMPYQVLEIWNDHRRLGL-----P 366
5 -3.300PB022697 Q5LAY4_BACFN/1-165 PB022697; Pfam-B_22697;  ali follow..  5  45..........................................................TGEQHSLLAYQIFRDEVMFGGFCQLIQNGYGGYIFDNP----KVMRLWGAEDFSKLVYKAKKIYDAHRHDLEKERTEDEFMAMYEQYEAFDD-----LEEEYLDIEEEVTALVASYVDDH....... 157
6 -3.160PB014998 gi|86133284|ref|ZP_01051866.1| hypothetical protein MED152_01230 [Tenacibaculum sp. MED152]gi|85820147|gb|EAQ41294.1| hypothetical protein MED152_01230 [Polaribacter dokdonensis MED152]  ali follow..  12  123..............................................................................................................IIETGFDWLITPQKIAVRAYTMNTLYLFGLENDW---VHPELKHLIETKIIHESKGTKARGKHILNLIEKHQKS. 193
7 -2.610HGC00787 gi|162657578|dbj|BAAX01002027.1|2.0 TMP01033;  ali follow..  9  1MEQTSPIQALLQQRTLLQ---IEYYTEKEAFRKQTEQMGMQRKVKRGDAWFPLRIGKSFYNSLNQNAIEVFRTEDQDIEH--FKAGETKTAQTDGKTEKKMLKYFSFTGTVSYVDGDRMVITVPDSAPLLELQQADVPVGVQL---SFDETSYKMMFDALDRT-MKAKNNRLAYLRDLFYSHRKA 186
8 -2.430HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473;  ali follow..  7  133........................................................................................................GILLTTPARTLLDCAVFPFPQALPIYDSALRKSLTTIEEVQSLMIQSVCVSVTKLLKYANPLSENGGESLMRGQITELSFG 215
9 -2.370PB128892 A6TNK2_9CLOT/1-174 PB128892; Pfam-B_128892;  ali follow..  8  26........................................................................................................PLANIQLTQFIMENDIMNQQFIGELKESSFIMEQEKDTGQLFMITDQGKKTLTYFISRIPEEKRLKIDHLLNIKKEEFVR. 109
10 -2.250PB000716 Q60CS7_METCA/1-294 PB000716; Pfam-B_716;  ali follow..  8  15.................................EDLKQTNAHGAEYARELQPLLGYSQWRRFEQAIERAITSCKESGNSPEHHFAGAGKPITGGKGAVQVVDDYHLSR-YLIAQNGD-IAQAQKYFAIQTRRQELSDQAAADLERLELRKQTAEEFKALSGAAQQAGVQS............... 159
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;