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Query: PB048276 _Gut.Meta.Jp.0112258_ gi|163310311|dbj|BABD01000385.1||2 (- 258:885~0 complete), from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst ENTQIKLSETVMVIDVAYLNFVINDLRKYFEPLLGRSLQTVDLALFTMYLAMDAGLKGSDNDVQVLLVYDKQSGKLEHCLPSDLKNELDGVAFKASLGEFSFMAAPSEGFVSRGDLYLDLLQIVLNAAEVKKLIVVPFNEEYGKEVENVLRECALENAGHKEEAKDIVYFRMEEPAAPAVCRWEMLGYPLMSVLGIRSELast
1 -104.000PB048276 _Gut.Meta.Jp.0112258_ gi|163310311|dbj|BABD01000385.1||2 (- 258:885~0 complete)  ali  100  1ENTQIKLSETVMVIDVAYLNFVINDLRKYFEPLLGRSLQTVDLALFTMYLAMDAGLKGSDNDVQVLLVYDKQSGKLEHCLPSDLKNELDGVAFKASLGEFSFMAAPSEGFVSRGDLYLDLLQIVLNAAEVKKLIVVPFNEEYGKEVENVLRECALENAGHKEEAKDIVYFRMEEPAAPAVCRWEMLGYPLMSVLGIRSE 199
2 -3.010PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]  ali follow..  8  104.......................................PSQLTQWPVQIKLAPVNAPYFDGAKLLIAADCTAYAYASFHEKFIK------------GHVTLIGCPKLD----SVDYSEKLTEIIRRNDIQSVTIVRMEVPCCGGLEMAAKKALQDSGKFIPWQVATI............................... 216
3 -2.920PB001934 Q6PSL5_CHLRE/821-1150 PB001934; Pfam-B_1934;  ali follow..  10  128..MERNDGPTLVVTDSQAIDVVHPWTITTFSIAMAYQQNGGRLDPFVEGLEALETLQDGDR-ISEACNHNRITSACNDIIPNKLEAALGGKKLQGGMDGLKLAIHCGGCMIDAQKMQQRMKDLHEAGVPVTNYGVFFSWAAWPDALRRALEPWGVEPPVGTPATPA................................. 321
4 -2.470PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033;  ali follow..  8  18ENGMQKKVTEPYLVDALSFTEAEARIIEEMTPFISGEFTVSDIKR-LIFITLDEKSGAEKKTSTQVLVQAADLRD---------AVKKLDEGMKGTMADYQIGMVSETPLMD....................................................................................... 140
5 -2.380HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066;  ali follow..  11  1.............MDEKEVSEMQEEMMTVLVVEPMKAPYVKHIPNELEDLAVGGDIEMTYPFDDEVGILLNGNGKFEGLPLNRALYDDHGQVYDAIAGTFLVTSLTPEQIEKFKEKYQSPEIFTLFNGELHVMKMPPEEEKEQKESRKNDAKQKNPAKKKNRSGDA................................. 163
6 -2.250PB021133 Q64YN4_BACFR/1-310 PB021133; Pfam-B_21133;  ali follow..  13  68LKTDAKFYAIHVSPSEKELQAMGNTEHEQAESMKNKGLSEADI-KFYGKIHFNRSHSDNELNMHCLIVSRKDQSNKKKLSPLTNHKNTKKGPIKGGFDRKSLFQQAKLGFGRLFNYDKQLTESFEYYNTMKN................................................................... 214
7 -2.230PB025553 _HOMD.0078651_ pint_c_1_4510 Prevotella intermedia 17 [1755134 - 1755736] ORF  ali follow..  12  9.............................................................................................KKSIAEYLLYMWQIEDIIRVYGCSLTRIRKEYIDKFDYTDEQKEEEEDWFGDLVRMMNQEGCRENGHLQINKVVM............................... 83
8 -2.020PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;  ali follow..  15  95......................IQDYEQEYENQLKDILETII----------------GVEDVSIVVNVDATSLKIFEKNRKTQETSTNETDKQGGKRTVSEMSSDEEIVIIKNGDKETPVVVQTKKPDIRGVLVVVDNVQIKKTIIEAVTRVL............................................. 213
9 -1.930PB162065 _Gut.Meta.Jp.0089312_ gi|162832207|dbj|BABA01012502.1||1 (- 0:1326~0 complete)  ali follow..  8  25...........ITITMEDVDLATADALKRAAASMGIGAQLLALESHRLSYEYYALSQRRELWTHDVGLFEYDRRGLRYHHLSVSWKHHPPVVTAET-QYLDGHELADPVPPEMDRQFLEAIKEVSARRMISTYYLMGEGFSGAESGKSWMNLSLK............................................ 171
10 -1.880HGC00933 gi|162753228|dbj|BAAZ01012194.1|2.0 TMP01261;  ali follow..  14  94....................................................................................QGTFDQKAFYEAFGIFD--NQSIEKSLVSKNPLVRILALLDRRLGKRRLLALEESMEQELDWVRAFYVIRMQAEGLMEKE................................... 171
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.