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Query: PB048631 gi|160885545|ref|ZP_02066548.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]gi|156109167|gb|EDO10912.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483], from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKIKFLSFIASFFMVSFVITSCLDDDNNIEYSPDATIHAFALDTAGLGSYKFTIDQLSREIYNEDSLPVHADTIIDKILIKTLTTASGVVTMKDKSGNDSVININDSIDLREPLTIKVWSTEALAGISPNQTKEYTIKVNVHQHDPDSLRWNHVGKMQDEIIGEQKTIEFNNKILTYSVVEGKNLKVYQNSNYSNWTAAGTNTTGDLTSTLPNSILPLNGIILATANNKVYESTDGVAWTISDKFSGNVKTFISKIPVDTDTKITYIKTEDGKQYIYSILESELGAADSEKKIEEADKEFPVDNISYTTFSKGSSYYRNIIVGKHEPAIEIDINNKKVPITIAWGYDGNVWAKLGTKSTTAYCPAFDNPTVIYYNELFYVFGNEFESIYVSQNEGIAWQKANKKFSFPHQDWNESGFTPSIEKPEFRGRKNYSIVQDTENKFIYVLFGKEQNITFTEEVEKAEETRATESKVRGPYSHDSEVWRARLNQLWFDLast
1 -129.000PB048631 gi|160885545|ref|ZP_02066548.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]gi|156109167|gb|EDO10912.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]  ali  100  1MKIKFLSFIASFFMVSFVITSCLDDDNNIEYSPDATIHAFALDTAGLGSYKFTIDQLSREIYNEDSLPVHADTIIDKILIKTLTTASGVVTMKDKSGNDSVININDSIDLREPLTIKVWSTEALAGISPNQTKEYTIKVNVHQHDPDSLRWNHVGKMQDEIIGEQKTIEFNNKILTYSVVEGKNLKVYQNSNYSNWTAAGTNTTGDLTSTLPNSILPLNGIILATANNKVYESTDGVAWTISDKFSGNVKTFISKIPVDTDTKITYIKTEDGKQYIYSILESELGAADSEKKIEEADKEFPVDNISYTTFSKGSSYYRNIIVGKHEPAIEIDINNKKVPITIAWGYDGNVWAKLGTKSTTAYCPAFDNPTVIYYNELFYVFGNEFESIYVSQNEGIAWQKANKKFSFPHQDWNESGFTPSIEKPEFRGRKNYSIVQDTENKFIYVLFGKEQNITFTEEVEKAEETRATESKVRGPYSHDSEVWRARLNQLWFD 493
2 -12.800HGC00947 gi|162844524|dbj|BABA01000185.1|4.0 TMP01280;  ali follow..  16  1MRVKLILLCLIAYPIISIVSSCSEEEDSMNARPMMQCYLYKIDGETERVVNDTLDSLTITAFGTDSIILNNQKRVHGLSLPLRYTADSTVLVFHYSKDVK--IKKDTIVIRQKNTPYFLSMD................................................................................................................................................................................................................................................................................................................................................................................... 123
3 -10.200HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  12  1MKK--LLLAMIAVAALISFAACDHNETDQRDRELDSINAF-LRNENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVLFESNGIYMQVINDGCGDYIAKGKTQNVL.............................................................................................................................................................................................................................................................................................................................................................................................. 110
4 -9.310HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;  ali follow..  15  1MKTLKITFVMLMTALFLVLPSCSKDDVNVTLTPSEEVNAFQQKYPDVKNVKWEILVGAYEAYSGTYSENGQHIVLDKVEAQAYITQGGKWVRSEFDVTKDYQAVRETIAAKGKKVDDVKLFD-----WSDRNDYFYVEFD-LLINFDGTLY...................................................................................................................................................................................................................................................................................................................................................... 163
5 -9.270PB012823 Q5LCS8_BACFN/1-272 PB012823; Pfam-B_12823;  ali follow..  13  1MKIKQMIKYIATLLLTVLFVACNNGKGQQPSEENEDPKAKEILDDETETPLMRII--GDTIYYSDSAPVYFKILKDTLSFWFHSLADNIIKLHKSEDPNDTLAFSFKSVEIIPTYTEVTKKD---SVVMFDGVRYRAYVYINPSQM-----KVVKTTYSEDGISMDNIYYDNVMHICVYEGKKSLYAKDITKQMFVDVIPTDFLQQAILSDMNFIGIDRKGYHYQAL-NLTISFDGK................................................................................................................................................................................................................................................................ 264
6 -9.060PB029229 gi|150007903|ref|YP_001302646.1| hypothetical protein BDI_1263 [Parabacteroides distasonis ATCC 8503]gi|149936327|gb|ABR43024.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]  ali follow..  1MKT--GIRVTVYALLAMILFSCEHKELCFHHPHMVTLR-VDFDWKNAPQ---DPEGMCVYFYPEEGSPIRFDFAGKDGGSVEIKEGRYRILCYNNDTESLLFRGMEGFDTHEGYTRDGNVFESIYGNGAHYAPPAKGSEDRVVICPDMMWGSCARNVEITELGLSYECISFADKDKVEWIESSEHVITLYPAELICTEVRNVKNMEYMTQACGSLSSMAPSMLFANEEETELHLESSKMTG............................................................................................................................................................................................................................................................ 251
7 -9.020PB019279 Q5LE73_BACFN/1-147 PB019279; Pfam-B_19279;  ali follow..  1MKTLTFKYLFLLAVAMINLTSCEIEIDDFYDDDNIGGSYYNKSLDLCSRLNFYLDRHGEDYIRVEYPNGRYSESVYSFTWNWEDRSQYSLRMVYGPGDVSYLDD..................................................................................................................................................................................................................................................................................................................................................................................................... 123
8 -8.570PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]  ali follow..  1MKKTIFYSLFSALFMLTSCSMFEIDNYE---EPSETIWGEVVDEATGKRVLTDQGSEGIRVFQNTKIFKGEYNVRIDGPFIPLVRENTDGTLLHDGSVNTEISGTTKVKFEVQPFLNVEFVGNPQVSNGVIKAQVRVTRGVSDEVFREKIQPMGNWKDEYLNVTDIQFFVSYSNTVGYRARDERWSSSINYEGKS----FEGLLGKEVTIQSNGNVPSGRKVFVNYDTPVGSGTRRWNYSEP........................................................................................................................................................................................................................................................... 265
9 -8.540HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  1M-MRRKNITWVWLLGAAFMVGCGKQVPENIIQPDRMLYDYHLSISMGNNLSYSDNYQKNYVFEKHHITYTRHTEELASLYKKLGEKHMQELLALRENKPAVSLPGDTVDVWYDRKLYWLTDVPLA-----NKVTFEIPADSNFKAKDAFLWSADYIFLSEGERRATMG------FNILFDNDSVVGRVKDITCSGVQTLYIKPDSAFAIKSVNGFIYYMDSDSSTNKPGLIINN................................................................................................................................................................................................................................................................... 245
10 -8.190PB011023 A7V2G7_BACUN/1-167 PB011023; Pfam-B_11023;  ali follow..  12  1MNIFKALALCLFAAVSFTFVSCDDDVPNKVTKGQTVEIRCELKKTGDFAIRYFQFEGEGTLKMDNGITFLPNDRKFRLYYTAQGDEAHNFIVVVEDNFGNSYELEFDFNNRN............................................................................................................................................................................................................................................................................................................................................................................................. 148

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 6 4 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.