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Query: PB048631 gi|160885545|ref|ZP_02066548.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]gi|156109167|gb|EDO10912.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483], from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 . 390 . 400 . 410 . 420 . 430 . 440 . 450 . 460 . 470 . 480 . 490 | |||||||
# | Score | Template | Links and tools | %id | First | MKIKFLSFIASFFMVSFVITSCLDDDNNIEYSPDATIHAFALDTAGLGSYKFTIDQLSREIYNEDSLPVHADTIIDKILIKTLTTASGVVTMKDKSGNDSVININDSIDLREPLTIKVWSTEALAGISPNQTKEYTIKVNVHQHDPDSLRWNHVGKMQDEIIGEQKTIEFNNKILTYSVVEGKNLKVYQNSNYSNWTAAGTNTTGDLTSTLPNSILPLNGIILATANNKVYESTDGVAWTISDKFSGNVKTFISKIPVDTDTKITYIKTEDGKQYIYSILESELGAADSEKKIEEADKEFPVDNISYTTFSKGSSYYRNIIVGKHEPAIEIDINNKKVPITIAWGYDGNVWAKLGTKSTTAYCPAFDNPTVIYYNELFYVFGNEFESIYVSQNEGIAWQKANKKFSFPHQDWNESGFTPSIEKPEFRGRKNYSIVQDTENKFIYVLFGKEQNITFTEEVEKAEETRATESKVRGPYSHDSEVWRARLNQLWFD | Last |
1 | -129.000 | PB048631 gi|160885545|ref|ZP_02066548.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]gi|156109167|gb|EDO10912.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483] | ali | 100 | 1 | MKIKFLSFIASFFMVSFVITSCLDDDNNIEYSPDATIHAFALDTAGLGSYKFTIDQLSREIYNEDSLPVHADTIIDKILIKTLTTASGVVTMKDKSGNDSVININDSIDLREPLTIKVWSTEALAGISPNQTKEYTIKVNVHQHDPDSLRWNHVGKMQDEIIGEQKTIEFNNKILTYSVVEGKNLKVYQNSNYSNWTAAGTNTTGDLTSTLPNSILPLNGIILATANNKVYESTDGVAWTISDKFSGNVKTFISKIPVDTDTKITYIKTEDGKQYIYSILESELGAADSEKKIEEADKEFPVDNISYTTFSKGSSYYRNIIVGKHEPAIEIDINNKKVPITIAWGYDGNVWAKLGTKSTTAYCPAFDNPTVIYYNELFYVFGNEFESIYVSQNEGIAWQKANKKFSFPHQDWNESGFTPSIEKPEFRGRKNYSIVQDTENKFIYVLFGKEQNITFTEEVEKAEETRATESKVRGPYSHDSEVWRARLNQLWFD | 493 |
2 | -12.800 | HGC00947 gi|162844524|dbj|BABA01000185.1|4.0 TMP01280; | ali follow.. | 16 | 1 | MRVKLILLCLIAYPIISIVSSCSEEEDSMNARPMMQCYLYKIDGETERVVNDTLDSLTITAFGTDSIILNNQKRVHGLSLPLRYTADSTVLVFHYSKDVK--IKKDTIVIRQKNTPYFLSMD................................................................................................................................................................................................................................................................................................................................................................................... | 123 |
3 | -10.200 | HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455; | ali follow.. | 12 | 1 | MKK--LLLAMIAVAALISFAACDHNETDQRDRELDSINAF-LRNENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVLFESNGIYMQVINDGCGDYIAKGKTQNVL.............................................................................................................................................................................................................................................................................................................................................................................................. | 110 |
4 | -9.310 | HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861; | ali follow.. | 15 | 1 | MKTLKITFVMLMTALFLVLPSCSKDDVNVTLTPSEEVNAFQQKYPDVKNVKWEILVGAYEAYSGTYSENGQHIVLDKVEAQAYITQGGKWVRSEFDVTKDYQAVRETIAAKGKKVDDVKLFD-----WSDRNDYFYVEFD-LLINFDGTLY...................................................................................................................................................................................................................................................................................................................................................... | 163 |
5 | -9.270 | PB012823 Q5LCS8_BACFN/1-272 PB012823; Pfam-B_12823; | ali follow.. | 13 | 1 | MKIKQMIKYIATLLLTVLFVACNNGKGQQPSEENEDPKAKEILDDETETPLMRII--GDTIYYSDSAPVYFKILKDTLSFWFHSLADNIIKLHKSEDPNDTLAFSFKSVEIIPTYTEVTKKD---SVVMFDGVRYRAYVYINPSQM-----KVVKTTYSEDGISMDNIYYDNVMHICVYEGKKSLYAKDITKQMFVDVIPTDFLQQAILSDMNFIGIDRKGYHYQAL-NLTISFDGK................................................................................................................................................................................................................................................................ | 264 |
6 | -9.060 | PB029229 gi|150007903|ref|YP_001302646.1| hypothetical protein BDI_1263 [Parabacteroides distasonis ATCC 8503]gi|149936327|gb|ABR43024.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] | ali follow.. | 9 | 1 | MKT--GIRVTVYALLAMILFSCEHKELCFHHPHMVTLR-VDFDWKNAPQ---DPEGMCVYFYPEEGSPIRFDFAGKDGGSVEIKEGRYRILCYNNDTESLLFRGMEGFDTHEGYTRDGNVFESIYGNGAHYAPPAKGSEDRVVICPDMMWGSCARNVEITELGLSYECISFADKDKVEWIESSEHVITLYPAELICTEVRNVKNMEYMTQACGSLSSMAPSMLFANEEETELHLESSKMTG............................................................................................................................................................................................................................................................ | 251 |
7 | -9.020 | PB019279 Q5LE73_BACFN/1-147 PB019279; Pfam-B_19279; | ali follow.. | 9 | 1 | MKTLTFKYLFLLAVAMINLTSCEIEIDDFYDDDNIGGSYYNKSLDLCSRLNFYLDRHGEDYIRVEYPNGRYSESVYSFTWNWEDRSQYSLRMVYGPGDVSYLDD..................................................................................................................................................................................................................................................................................................................................................................................................... | 123 |
8 | -8.570 | PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492] | ali follow.. | 8 | 1 | MKKTIFYSLFSALFMLTSCSMFEIDNYE---EPSETIWGEVVDEATGKRVLTDQGSEGIRVFQNTKIFKGEYNVRIDGPFIPLVRENTDGTLLHDGSVNTEISGTTKVKFEVQPFLNVEFVGNPQVSNGVIKAQVRVTRGVSDEVFREKIQPMGNWKDEYLNVTDIQFFVSYSNTVGYRARDERWSSSINYEGKS----FEGLLGKEVTIQSNGNVPSGRKVFVNYDTPVGSGTRRWNYSEP........................................................................................................................................................................................................................................................... | 265 |
9 | -8.540 | HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399; | ali follow.. | 8 | 1 | M-MRRKNITWVWLLGAAFMVGCGKQVPENIIQPDRMLYDYHLSISMGNNLSYSDNYQKNYVFEKHHITYTRHTEELASLYKKLGEKHMQELLALRENKPAVSLPGDTVDVWYDRKLYWLTDVPLA-----NKVTFEIPADSNFKAKDAFLWSADYIFLSEGERRATMG------FNILFDNDSVVGRVKDITCSGVQTLYIKPDSAFAIKSVNGFIYYMDSDSSTNKPGLIINN................................................................................................................................................................................................................................................................... | 245 |
10 | -8.190 | PB011023 A7V2G7_BACUN/1-167 PB011023; Pfam-B_11023; | ali follow.. | 12 | 1 | MNIFKALALCLFAAVSFTFVSCDDDVPNKVTKGQTVEIRCELKKTGDFAIRYFQFEGEGTLKMDNGITFLPNDRKFRLYYTAQGDEAHNFIVVVEDNFGNSYELEFDFNNRN............................................................................................................................................................................................................................................................................................................................................................................................. | 148 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Shiryaev SA, Ratnikov BI, Chekanov AV, Sikora S, Rozanov DV, Godzik A,Wang J, Smith JW, Huang Z, Lindberg I, Samuel MA, Diamond MS, Strongin AY. Cleavage targets and the D-arginine-based inhibitors of the West Nile virus NS3 processing proteinase. Biochem J. 2006 Jan 15;393(Pt 2):503-11. |