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Query: PB071107 _Gut.Meta.Jp.0066071_ gi|162701604|dbj|BAAY01026246.1||2 (+ 344:749~0 complete), from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKRFASHFLFLPAYGYLKQYAVETEEGSVVRIFPLTEEIENVEWLPGAIVLLTQDELKELDTNSPLVNAPQNYSKTSAEFYYNSTRILVKFPQNLLMALPPSIEGRCQLLPVYFSNFDITTMLPAAGTRHRLLast
1 -81.500PB071107 _Gut.Meta.Jp.0066071_ gi|162701604|dbj|BAAY01026246.1||2 (+ 344:749~0 complete)  ali  100  1MKRFASHFLFLPAYGYLKQYAVETEEGSVVRIFPLTEEIENVEWLPGAIVLLTQDELKELDTNSPLVNAPQNYSKTSAEFYYNSTRILVKFPQNLLMALPPSIEGRCQLLPVYFSNFDITTMLPAAGTRHRL 132
2 -3.050PB053244 _HOMD.0087087_ pint_c_2_2642 Prevotella intermedia 17 [158005 - 157583] (REVERSE SENSE) ORF  ali follow..  1.............SIVYAIGGLLMAVGTGLYAFFIIQDVACIVMLIGAICFATMQMRQQYLGTNLTIRRLRKIMVLADIGFILA................................................ 71
3 -2.940PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401;  ali follow..  15  1................MDIGPCSIPTGEFLVGDPL................................................................................................. 19
4 -2.750PB015266 gi|154494998|ref|ZP_02034003.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]gi|154085548|gb|EDN84593.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]  ali follow..  71...LEANSVQPLNGRVYNTNFVSLNDGQAMVQIASNSPYPGPNGLGGI.................................................................................... 119
5 -2.710PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF  ali follow..  1............STQTSASVLNLINPEDIESQTILKDAAATALY-NGVVLITTKS............................................................................. 47
6 -2.610PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;  ali follow..  143ANVQTKGSVSYRQHELGASDIARTEDGRLAWSYPIQPG---SGHQRGVLLSDMTAMEDREMQAFDEHEF............................................................... 214
7 -2.560PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033;  ali follow..  12  97.KKTSTQVLVQAADTMADYQIGMVSETPLMDVYPYSAGPND........................................................................................... 150
8 -2.550HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178;  ali follow..  15  43.RQKRTHRLC-------------NLGGTIESLAPEFKDLTRTEMTE...................................................................................... 74
9 -2.380HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066;  ali follow..  16  16....................VLVVEPMKAPYVKHIPNELEDLQ-VGGDIE.................................................................................. 46
10 -2.270HGC00965 gi|163282470|dbj|BABD01028218.1|2.0 TMP01310;  ali follow..  31  78........................PALRRREIFPMTEETAVAQYLN...................................................................................... 101

FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 6 0 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30.