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current user: public |
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Query: PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF, from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . | |||||||
# | Score | Template | Links and tools | %id | First | STQTSASVLNLINPEDIESQTILKDAAATALYGSRGANGVVLITTKSGRRGKTHIAFTAEYGTSDFATPHALDYMDAGQYAQYTWESLKNKYLYDRKAMPEQAKADTYESLLPEAERYAYRNLAAASGLYHPDDPFDGTFNYKNMTPEQQKMFITNPRIVNWRDAIFKTGAVQKYDLSLNGGGDKTTYYVSFGYLKNDGLVQGSVFERFSGALSLNLKLHDRVLLKLSEKLSRARQD | Last |
1 | -99.900 | PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF | ali | 100 | 1 | STQTSASVLNLINPEDIESQTILKDAAATALYGSRGANGVVLITTKSGRRGKTHIAFTAEYGTSDFATPHALDYMDAGQYAQYTWESLKNKYLYDRKAMPEQAKADTYESLLPEAERYAYRNLAAASGLYHPDDPFDGTFNYKNMTPEQQKMFITNPRIVNWRDAIFKTGAVQKYDLSLNGGGDKTTYYVSFGYLKNDGLVQGSVFERFSGALSLNLKLHDRVLLKLSEKLSRARQD | 237 |
2 | -4.680 | PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815; | ali follow.. | 11 | 353 | .....IDNYAFIVPKQASDLKALSHCVGGSNYIKQHIEGTIIFVRDKQDLEKSLYTLEYKNG-NCDPTKDVQMAANK-KLLKSKTKVLQN................................................................................................................................................... | 452 |
3 | -2.720 | PB071107 _Gut.Meta.Jp.0066071_ gi|162701604|dbj|BAAY01026246.1||2 (+ 344:749~0 complete) | ali follow.. | 6 | 13 | AYGYLKQYAVETEEGSVVRIFPLTEEIENVEW-----PGAIVLLTQD.............................................................................................................................................................................................. | 55 |
4 | -2.350 | PB001823 Q5L7Q9_BACFN/1-326 PB001823; Pfam-B_1823; | ali follow.. | 10 | 110 | ........FEDTQNGDYDYNDLIIHVKNTASNHAYQHPTEQTIEIQPIALGS---TKTIKLGCILSDGSTHMISDDVRTDLFGGRQGFINTVNDNDPIRYKLASTNIKNYAMPKKEKTSAAWVVDGKRMYAASSDIDYKSYDMVNKENMPYGLAVSNGNGTFSYPQEKNSLFETYDWINGKVSSIGSFQKELVYKYCSGGIIGEDGKSHKIWDYLD..................... | 325 |
5 | -2.270 | PB002589 gi|91201099|emb|CAJ74158.1| hypothetical protein [Candidatus Kuenenia stuttgartiensis] | ali follow.. | 17 | 18 | .........KNLRTDDGLRLEILSPGWWNNEEGPDFKHAEFFLEGKGLIRGSVEIHVFAS................................................................................................................................................................................. | 68 |
6 | -2.260 | PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791; | ali follow.. | 16 | 82 | ......DIINNRMSFCIQKVGMVRDLSYSYALLDENNNGMIITYAKPVKDGKSNYSLSVE................................................................................................................................................................................. | 154 |
7 | -2.180 | PB033130 gi|160880323|ref|YP_001559291.1| transglutaminase domain protein [Clostridium phytofermentans ISDg]gi|160428989|gb|ABX42552.1| transglutaminase domain protein [Clostridium phytofermentans ISDg] | ali follow.. | 14 | 8 | .......SLEILNYAEFASVTELYTDEKGCVSITIGLGDIHIRAVKDGFFAEAMGHVRTQEEIT............................................................................................................................................................................. | 64 |
8 | -2.090 | PB002776 gi|157737147|ref|YP_001489830.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]gi|157699001|gb|ABV67161.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018] | ali follow.. | 10 | 165 | ........LEVIEQFTYPKYYIAKESYNSSVWGHYGQGGVCLIFETNNEGEIPFLNVYTGLKLKEVNYNGNFEEINFFESLGKIPQPLVESFYIDENKNKSILFDKVLNNQEEWRKLF-----------------------------WDKYEKNKLTKTKDW------------------------------TYEKEYRIVLNRLMDYEIKELKYDFNCLKGVIFGIKTPQNKKDE. | 342 |
9 | -2.090 | PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033; | ali follow.. | 14 | 56 | .......TVSDIKRANYSELFPSDEESADRWFKCKLI--FITLDEKSGAEKKTSTQV.................................................................................................................................................................................... | 103 |
10 | -1.870 | PB011023 A7V2G7_BACUN/1-167 PB011023; Pfam-B_11023; | ali follow.. | 14 | 88 | .....EGTLKMDNGITFLP---LENEKFRLYYTAQGDE-IVVVEDNFGNSYELEFDFNNR................................................................................................................................................................................. | 147 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30. |