|
current user: public |
|
Query: PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8], from HGM_OVER |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . | |||||||
# | Score | Template | Links and tools | %id | First | LTETQFKVQAEQQRLEAVTAQVADVEQSLEKTKAAAEKQKKKLEALQKETKAARATALTVQDIEAMGKKATFGNNITLTPDECRTLKDYAVSSFAEKAEKLKYKQKYEQAEKSASVWKRRFEALNEKYLELKKKAQPYLDALEIASEKVRAFLDAVLARGKETRELKIPARKRGQDM | Last |
1 | -91.500 | PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8] | ali | 100 | 1 | LTETQFKVQAEQQRLEAVTAQVADVEQSLEKTKAAAEKQKKKLEALQKETKAARATALTVQDIEAMGKKATFGNNITLTPDECRTLKDYAVSSFAEKAEKLKYKQKYEQAEKSASVWKRRFEALNEKYLELKKKAQPYLDALEIASEKVRAFLDAVLARGKETRELKIPARKRGQDM | 177 |
2 | -4.960 | HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997; | ali follow.. | 9 | 1 | ..MTPYKV---SHQLKKLNNSSSLTKKNMTMEENTVHPARKLLLGQLIAYLLQAVAVVVGFESDLLEVGACAEDFVKYQMLMLMEVLTICFIPMALK................................................................................ | 93 |
3 | -3.460 | HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255; | ali follow.. | 6 | 5 | IIVPMARTATEKLEMRGQSVTVENIGKTVTDGFEKVSNNVNDFISSDKPRNFFQKLADVFVLV.................................................................................................................. | 67 |
4 | -3.270 | HGC00803 gi|163280588|dbj|BABD01030100.1|2.0 TMP01051; | ali follow.. | 18 | 30 | ....AFLVDKVKDELQKVIDLLESGETDTEVIQETLDEAVCGINDLQEEFDENDS------EIETVARDCI.......................................................................................................... | 90 |
5 | -2.960 | PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete) | ali follow.. | 10 | 33 | ........WDGTINKAKLTKYLQLSSQQNEQVASICDYFQEQMKVANSSKKNSDQKVRNAVYGNLKLMKNT------LTEKQYSDYLRLMAL..................................................................................... | 110 |
6 | -2.850 | PB032818 Q5LA03_BACFN/1-211 PB032818; Pfam-B_32818; | ali follow.. | 10 | 72 | ...............................................................EKSASRKMLMQDYGISESFFKEIDTSIKKNCRTQNDVQAYLFMYQGFSSDLMMLMGNLMQWKFRMPAIFKKARQYKERLGFSEQWMSEYVYNIVLLAKKEPKHKDEEAKA.... | 211 |
7 | -2.800 | PB019279 Q5LE73_BACFN/1-147 PB019279; Pfam-B_19279; | ali follow.. | 10 | 46 | ...............................................................LDLCSRPWADTFYDADGNYCYQELNFYLDRHGEDYIRVEYPNGRYSESVYSFTWNWEDRSQYSLRMVYGPGDVSYLDDVWIRGNVLSGYLDG...................... | 137 |
8 | -2.690 | PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086; | ali follow.. | 16 | 103 | .........KDSKTVESLGKELKASAPEYQGLDAAAVKLNEQADWYETHEKSLSKAVRAVVE--SKAAKRLDDAKTNLTADEASKLLADSDGKVADNA............................................................................... | 199 |
9 | -2.530 | PB044822 Q89ZL7_BACTN/1-147 PB044822; Pfam-B_44822; | ali follow.. | 9 | 1 | .......MKLSQQSLSTIESAIQKAAGKYVC-----GCDQTAVTDIHLQPDQTSGQLTIYNDDDEELANVMIEEWATYDGDDFMENVKPNLKSTLCRMKDAGDFDKVTILKPYSFVLVDEDKETVAELLLIDDDT----ELLKGLDKELDEFLKNLLE................... | 147 |
10 | -2.470 | PB022697 Q5LAY4_BACFN/1-165 PB022697; Pfam-B_22697; | ali follow.. | 12 | 2 | .......IEVTDASLQKAAGEGMDEQVFTDKYKEVIGGEAETMPLLTGEQHSLLAYQIFRDEVMFGGFCQLIQNGYLWGAEDFSKLVYKAKKIYDAHRHDLEKERTEDEFM-AMYEQYEAFDDLEEEYLDIEEEVTALV--ASYVDDHLELFAKIV..................... | 165 |
FFAS is supported by the NIH grant R01-GM087218-01
|
![]() ![]() ![]() ![]() ![]() ![]() |
Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |