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Query: HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKNIYNTLGMTKACLCALAVSLVTTGCSDLLDKEPPSAISDGSFWTGEGDAMLALTGCYRFQTGWSHDDFATPQGLLYLDFAGGNGTEKENFSTLMASSNTVATNSNLRWYWGNAYTQIAKYNTFLENITDCPMEESKKEQWSAEVKCLRAYFFLNLAFYYTDVPMPLKTLSVDEANSISQTPQTEVYSQVEKDLKTAIDLLPVHYLRGIWRLPGGGLast
1 -6.760sp|Q6ZVS7|F183B_HUMAN Protein FAM183B OS=Homo sapiens GN=FAM183B PE=2 SV=2  ali   1......................................................................................................................MAGHPKERVVTDEVHQNQILRELYLKELRTQKLHTQYHVNPLRKVHRITRKPMSWHDNLEEPADARFLNLIHHAAQGPTKKYPEAQTENQEIG...... 93
2 -6.040sp|A6NL82|F183A_HUMAN Protein FAM183A OS=Homo sapiens GN=FAM183A PE=2 SV=2  ali   1......................................................................................................................MAGHPKEKVIPDEVHQNQILRELYLKELRTQKLYTQYHVNPLRKIHTVTRKPMSWHDNLEEPADARFLNLIHHAAQGPRKKYPETQTENQEVG...... 93
3 -5.990sp|O95071|UBR5_HUMAN E3 ubiquitin-protein ligase UBR5 OS=Homo sapiens GN=UBR5 PE=1 SV=2  ali   11  30.........................................................................................................................LGTLVKELQNKYTPGRREEAIAVTMRFLRSVARVFVILSVEMASSKKKNNFIPQPIGKCKRVFQALLPYAVEELCNVAESLIVPVRMGIARPT... 122
4 -5.790tr|B3KPW6|B3KPW6_HUMAN Uncharacterized protein OS=Homo sapiens GN=CNOT1 PE=2 SV=1  ali   13  1...........................................................................................................FQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKRERLFEEYRFFPQYPDKELACLFGGI-MALGLALRYVLEALRKPFGSKMYYFGIAALDRFKNRLKD............. 116
5 -5.610sp|Q32MH5|K1370_HUMAN Uncharacterized protein KIAA1370 OS=Homo sapiens GN=KIAA1370 PE=2 SV=2  ali   13  119.......................................................................................................QDALLLERW------------ILEPVPRQNGDRFIEEKTLLLA--VRSFVFFSQLSAWGAIPILYRISAADVDLQWNFSQTPIEHVFPVPNLKVSVQSLP.............. 217
6 -5.450sp|Q8N6G2|CM026_HUMAN Uncharacterized protein C13orf26 OS=Homo sapiens GN=C13orf26 PE=2 SV=1  ali   34......................................................................................................ALSNQFISLTKRDFVDRSKAQKIKKSSHLSPPDTEFRRNYQIPAK---SFKY---VASQGLVPSVLHSYLRNQEHTKKQTTYQSDYDKTYPDFLMLLNSFTSSQVKEYLQSLSY. 164
7 -5.380sp|Q9P2D8|UNC79_HUMAN Protein unc-79 homolog OS=Homo sapiens GN=UNC79 PE=2 SV=3  ali   2.......................................................................................................................................STKAEQFASKIRYLQEYHYFSLLSILSRTGKKENQDASNLTVPMTMCLFPVPFPLTPSLRPQVSSINPTVTRSLLYSV.... 102
8 -5.180sp|Q9Y4X5|ARI1_HUMAN E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens GN=ARIH1 PE=1 SV=2  ali   12  17...............................................................................................................YMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLATLMYTYVFAFY-----------------LKKNNQSIIFENNQADLENATEVL............... 101
9 -5.100sp|A5YKK6|CNOT1_HUMAN CCR4-NOT transcription complex subunit 1 OS=Homo sapiens GN=CNOT1 PE=1 SV=2  ali   11  1..........................................................................................................YFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKRERLFEEYRFFPQYPDKELACLFGGI----------EKGLVTYMALGLALRYVLEALRKPFGS................ 98
10 -4.680sp|Q8TD43|TRPM4_HUMAN Transient receptor potential cation channel subfamily M member 4 OS=Homo sapiens GN=TRPM4 PE=1 SV=1  ali   10  10...................................................................................................................................................ILRRVFYRPYLQIFGQIPQ-MEHSNCSSEPGFWAHPPGAQAGTCVSQ....................... 62

FFAS is supported by the NIH grant R01-GM087218-01
1 4 2 6 4 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.