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Query: HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000;, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80
# Score Template Links and tools%idFirst LEDGDFVKLSNLTIGYTLPIRNNKYMKSLRVYVSGNNLFCITGYSGLDPELDISNVQAPGVEYRDTYPTTRSFTFGVNIGFLast
1 -6.660tr|B9ZVK6|B9ZVK6_HUMAN Uncharacterized protein OS=Homo sapiens GN=C10orf53 PE=4 SV=1  ali   11  31......LQAVLAIDGHEVILEKIEDWNVVELMVNEEVIFHCNEFGKLTP................................ 77
2 -5.980sp|Q8IXX5|T183A_HUMAN Transmembrane protein 183A OS=Homo sapiens GN=TMEM183A PE=2 SV=2  ali   13  2...........................KFRAHDACSGRVTVADYANSDPAVVRSGRVKKAV--ANAVQQEVKSLCGLEAS. 52
3 -5.700sp|Q9H3F6|BACD3_HUMAN BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 OS=Homo sapiens GN=KCTD10 PE=1 SV=1  ali   14  15.QGRKIAEVCCTSIVYATEKKQKVEFPEARIYEETLNILLYEAQDGRGP................................ 63
4 -5.090sp|Q8WZ19|BACD1_HUMAN BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1 OS=Homo sapiens GN=KCTD13 PE=1 SV=1  ali   16  15.QGRKIAEVCCTSIVYATEKKQKVEFPEARIFEETLNILIYETPRGPDPAL.............................. 65
5 -5.010sp|Q9H8H0|NOL11_HUMAN Nucleolar protein 11 OS=Homo sapiens GN=NOL11 PE=1 SV=1  ali   14  39.ASKECLSVWNIKFQTLQTSKELPQGTSGQLWYYGEHLFMLHG...................................... 80
6 -4.930sp|Q6NUM6|TYW1B_HUMAN tRNA wybutosine-synthesizing protein 1 homolog B OS=Homo sapiens GN=TYW1B PE=2 SV=2  ali   13  16.................................GGSKTFSAKDYMARTPHWALFGANERSFD................... 44
7 -4.900sp|Q9NV66|TYW1_HUMAN tRNA wybutosine-synthesizing protein 1 homolog OS=Homo sapiens GN=TYW1 PE=1 SV=2  ali   17  16.................................GGSKTFSAKDYMARTPHWALFGASERGFD................... 44
8 -4.810sp|A6NHS7|MANS4_HUMAN MANSC domain-containing protein 4 OS=Homo sapiens GN=MANSC4 PE=4 SV=2  ali   29  1..................................GTSAILYNITDGIDPDL.............................. 17
9 -4.700sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2  ali   17  20...........................PMSVYASTASCSDVSACCEVESEVMMSD.......................... 47
10 -4.680sp|Q8WXX7|AUTS2_HUMAN Autism susceptibility gene 2 protein OS=Homo sapiens GN=AUTS2 PE=1 SV=1  ali   13  8...........VGVTGIHPMNSISSLDRTRM---------MTPFMGISPLPGGERFPYPSFHWDPIRDPLRDPYRELDI.. 66
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 8 6 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Jaroszewski L, Li W, Godzik A. Comparison of sequence profiles. Strategies for structural predictions using sequence information. Protein Sci. 2000 Feb;9(2):232-41.