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Query: HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473;, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKEHKEVSALLQQAKQERRCCYGTSDAQRRALKRRLHAGELVSPYKNLYADRTLWNTMTREQQSLQVIRALSAIHPQWVFAGLSAACVYGLQHNYSLHDGTVHIASKSGIGGGDEARLNRIYINRIPTRKHNGILLTTPARTLLDCAVFPFPQALPIYDSALRKSLTTIEEVQSLMIQSVCDEVSVTKLLKYANPLSENGGESLMRGQITELSFGSSCWQCSSLast
1 -5.970sp|Q6ZP82|CC141_HUMAN Coiled-coil domain-containing protein 141 OS=Homo sapiens GN=CCDC141 PE=1 SV=1  ali   15....................................................................................................................................GLEFLNLINMAKENEILDVKNEVYLMKNTMENQKAEREELSLLRLAWQLKATESKPGKQQWAAFKEQLKKTSHNLKL.............. 91
2 -5.100sp|Q9BUK6|MSTO1_HUMAN Protein misato homolog 1 OS=Homo sapiens GN=MSTO1 PE=1 SV=1  ali   16  29.......................................................................................................................................CSAILATALDTVTVPYR---------LCSSPVSMVHLADMLSFCGKKVVTAGAIIPFPLAPGQSLPDSLMQ................. 90
3 -4.820sp|Q8N201|INT1_HUMAN Integrator complex subunit 1 OS=Homo sapiens GN=INTS1 PE=1 SV=2  ali   12  1.....................................................................................................................................LRVLGPEDDLAGMFLQIFPLSPDPVALALQQ--ALGQELARVVQGSPEVPGITVRVLQALATLLSSPHGGALVMSMHRSHFLAPLLRQL. 97
4 -4.590sp|Q86WI3|NLRC5_HUMAN Protein NLRC5 OS=Homo sapiens GN=NLRC5 PE=1 SV=3  ali   10.......................................................................................................................................NKNLWSCLVRLLTKDPEWLNAKMKFFL------PNTDLDSRNETLDPEQRVILQLNKLHVQGSDTWQSFIHCVCMQLEVP---LDLEV 88
5 -4.520tr|E7ERF0|E7ERF0_HUMAN Uncharacterized protein OS=Homo sapiens GN=CCDC141 PE=4 SV=1  ali   15....................................................................................................................................GLEFLNLINMAKENEILDVKNEVYLMKNTMENQKAEREELSLLRLAWQLKATESKPGKQQWAAFKEQ........................ 81
6 -4.310tr|C9JR62|C9JR62_HUMAN Uncharacterized protein OS=Homo sapiens GN=CCDC141 PE=4 SV=1  ali   15....................................................................................................................................GLEFLNLINMAKENEILDVKNEVYLMKNTMENQKAEREELSLLRLAWQLKATESKPGKQQWAAFKEQLKK..................... 84
7 -4.310sp|Q4G0P3|HYDIN_HUMAN Hydrocephalus-inducing protein homolog OS=Homo sapiens GN=HYDIN PE=1 SV=3  ali   17  25.....................................................................................................................................VIVKNPCNFPIEFYSLEFDQQYLIEEKILRKLKGYDSYNTLLLPPRNPGEKLPPELYE................................ 82
8 -4.260sp|O43422|P52K_HUMAN 52 kDa repressor of the inhibitor of the protein kinase OS=Homo sapiens GN=PRKRIR PE=2 SV=2  ali   8..........................................................................................................................................................VPTVEHII-------QELKDIFSEQHLKALKCLSLVPSVMGQLKFNTSEEHHADMYRSDLPNP...... 63
9 -4.180sp|O75129|ASTN2_HUMAN Astrotactin-2 OS=Homo sapiens GN=ASTN2 PE=2 SV=2  ali   12  3................................................................................................................................................KCLKPDSKFNDTLFGEMLHGYNNRTQHVNQVFQMTFRENNFIKDFPQLADGLIPLPVEEQCRGVLSE---PLPDLQLLT 82
10 -4.130sp|Q5VW38|GP107_HUMAN Protein GPR107 OS=Homo sapiens GN=GPR107 PE=2 SV=1  ali   1.................................................................................................................................RVHHLALKDDVRHKVHLNTFGFFKDVNVSSLSLNEPEDKDVTIGFSLDR-----TKNDGFSSYLDEDVNY--KQSVSVTLLILDISRSEVRVKS 95

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 6 1 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.