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Query: HGC00429 gi|162734516|dbj|BAAZ01029480.1|1.0 TMP00411;, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLKENQGYVIRRTILFDNQCGFALGENSRAPNPFVTWQFNGQDGHRDYFWGHYMNEPDMAERDLLNRARDYQRRYHVEEVEQAPDKETYLYYSTQRPIDIGTYPNSYFNRPVHMDLYFTRQQVTGEIFQAWGAITYAHPLTEREMQDYELRPSRNNLDIRRQMDAQAQVVGKWEDAHHVPDQKRLTWFYPDFGSYVVKEYVTPDQLAVRVRSIERQEAARAHKEAKRQPPIAEQLKAAQREAQGHRGPELPKRSPLast
1 -5.610sp|Q9NQC3|RTN4_HUMAN Reticulon-4 OS=Homo sapiens GN=RTN4 PE=1 SV=2  ali   22  18.....................................................................................................................................................................................................PEGLTPDLVQEACESELKMDLVQTSEVMQESLYPAAQLCPSFEESEATPSPVLPMEAP 90
2 -5.300sp|Q659C4|LAR1B_HUMAN La-related protein 1B OS=Homo sapiens GN=LARP1B PE=1 SV=2  ali   23  4LLKENQVYHKYRRRCLSERKRLGIGQSQEMNTLFRFWSFFLRD---HFNKKMYEEFRQLAWEDAKENYR.......................................................................................................................................................................................... 73
3 -5.130sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2  ali   21  3LLKENHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRD---HFNKKMYEEFKQLALEDAKEGYR.......................................................................................................................................................................................... 72
4 -5.070sp|Q16825|PTN21_HUMAN Tyrosine-protein phosphatase non-receptor type 21 OS=Homo sapiens GN=PTPN21 PE=1 SV=2  ali   20  1.........................................................................................................................................................................................ANSTPDLSRHLYISSSNPDLITRRVH--------SVQTFQEDSLPVAHSLQEVSEPLTAARHAQLHKRN. 62
5 -4.960sp|O75165|DJC13_HUMAN DnaJ homolog subfamily C member 13 OS=Homo sapiens GN=DNAJC13 PE=1 SV=5  ali   1................ANWDLFYYRFGQDHARSNLIWNFKTRE------------ELKDTLESEMRAFNIDRELGSANVISWNHHEFEVKYECLAEEIKIGDY-----RLLLEEDENEESGSIKRSYEFFNELYHRFLLTPKVNMKCLCLQALAIVYGRCHEEIGPFTDTRYIIGMLERCTDKLERDRLILFLNKLILNKKNVKDLMDSIRILVDLLTLAHLHVSRATVPLQSNVIEAAPDMKRESEK....... 219
6 -4.880sp|A5D8W1|CG063_HUMAN Uncharacterized protein C7orf63 OS=Homo sapiens GN=C7orf63 PE=2 SV=3  ali   12  30FLEKEGIFLLLDLLALNQ-CNLILGDNPKTAAHVNAWQGKKDQTAASLLIKLWRKEEKEVKRDKNGKIIDTKKPLFTSFQEEQKIIPLPANCPSIAVMDVSENIRAKIYAILGKLDFENLPGLSAEDFVTLCIIHRYLDFKIGEIKLEKLRPVTTDKKALEAITTASENIGKMVASLQS............................................................................ 226
7 -4.690sp|Q8IWR0|Z3H7A_HUMAN Zinc finger CCCH domain-containing protein 7A OS=Homo sapiens GN=ZC3H7A PE=1 SV=1  ali   10  20..PKLMDFTYHANIDHKCKKDILIGRIKNVEDK--SWKKIRPRPTKTNYEGPYY......................................................................................................................................................................................................... 69
8 -4.570sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3  ali   19  2........SLLEAVLQECHNTFTACFHSFYPTPALQWAC........................................................................................................................................................................................................................ 32
9 -4.450tr|F8WEG0|F8WEG0_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1  ali   21  3........................................................................................................................................................................................................................................TRYHEAVRKVLLKTFPNQVFRIP 25
10 -4.430tr|F8WA13|F8WA13_HUMAN Uncharacterized protein OS=Homo sapiens GN=MYCBP2 PE=4 SV=1  ali   12  33....NLRGIPIGMLVLGNKVKAV----GEVTNSEGTWVQLDQNSMVEFCESDEGEAWSLARDR................................................................................................................................................................................................ 87

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 6 1 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Godzik A. Surface map comparison: studying function diversity of homologous proteins. J Mol Biol. 2001 Jun 8;309(3):793-806.