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Query: HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .
# Score Template Links and tools%idFirst MIYLHARGLFHVLLLICNRELLLIGKRKDEDDMAKSTKTYEERIRALEKKEQESIEATKKLIAQRKELEKRKKAEESKKRTHRLCQIGGAVESVLGCPIEEEDLPKLIGFLKRQETNGKFFSKAMQKELVTDMEEVLast
1 -5.530sp|Q9Y238|DLEC1_HUMAN Deleted in lung and esophageal cancer protein 1 OS=Homo sapiens GN=DLEC1 PE=2 SV=2  ali   17  45..............................DQLQQIRELYKQRLDEFEMLERHITQAQARAIAENERVMSQAGVQD............................................................ 90
2 -5.280sp|Q8TDJ6|DMXL2_HUMAN DmX-like protein 2 OS=Homo sapiens GN=DMXL2 PE=1 SV=2  ali   15  7...LLHLTMVKLALHNVKNFFPIAG---EFSELPVTSPLGIAVIKNLENWEQILQEKMDQFEGPPPNYINTYPTDLSVGAGPAILRNKAMLEP--NTPFKSRDVKRLWHFLVKQEVLQETFIR............. 128
3 -5.280tr|B2RTR3|B2RTR3_HUMAN DMXL2 protein OS=Homo sapiens GN=DMXL2 PE=2 SV=1  ali   15  7...LLHLTMVKLALHNVKNFFPIAG---EFSELPVTSPLGIAVIKNLENWEQILQEKMDQFEGPPPNYINTYPTDLSVGAGPAILRNKAMLEP--NTPFKSRDVKRLWHFLVKQEVLQETFIR............. 128
4 -4.940sp|Q6ZQQ6|WDR87_HUMAN WD repeat-containing protein 87 OS=Homo sapiens GN=WDR87 PE=2 SV=3  ali   22  3.......ALYHVLRML-------------QQRYPKDSTAWMEQFYQLMDLYQLKSPRIQKLLQE........................................................................ 46
5 -4.780sp|Q9Y5R5|DMRT2_HUMAN Doublesex- and mab-3-related transcription factor 2 OS=Homo sapiens GN=DMRT2 PE=2 SV=2  ali   32  1.................................AFADKELENIMLEREYKEREMLETS.............................................................................. 25
6 -4.660tr|E9PIK4|E9PIK4_HUMAN Uncharacterized protein OS=Homo sapiens GN=TP53I11 PE=4 SV=1  ali   23  1..................RKILGVGGEDDDGEVHRSKIS................................................................................................. 21
7 -4.620sp|Q5JSL3|DOC11_HUMAN Dedicator of cytokinesis protein 11 OS=Homo sapiens GN=DOCK11 PE=1 SV=2  ali   16  2.LRYIQQGIFSVIFLVARIEKVLQG---NITHCAEPYIKNSDPVKTAQKVHRTAKQVCSRLGQYRMPF.................................................................... 71
8 -4.460sp|Q9Y4D8|K0614_HUMAN Probable E3 ubiquitin-protein ligase C12orf51 OS=Homo sapiens GN=C12orf51 PE=1 SV=5  ali   13  50.......................DDDIPQEDHYALLVKAWETKVFPTIRRRFRNEAERKSGLDQIKGALQLGMVDIARQTVEFLYEENGGIPRDLYLPTIEDIKDEANKFTIDKVRKGLTVVTRSPDSNNVASSA. 161
9 -4.420sp|O60293|ZC3H1_HUMAN Zinc finger C3H1 domain-containing protein OS=Homo sapiens GN=ZFC3H1 PE=1 SV=3  ali   15  13.............ILSYNLSLIGCAETSTNEEITASAEKYVEKLFGVNKDRMSMDQMAVLLVSNINESKGHTP............................................................... 72
10 -4.410sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2  ali   10  72................................AAEKEEEVHARLLHCVSKQKILLSQARRT-QKHLQMLLAKHVVKHYGQ-----QMKLSMKHQL......................................... 128
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Tolerating some redundancy significantly speeds up clustering of large protein databases. Bioinformatics. 2002 Jan;18(1):77-82.