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Query: HGC00579 gi|163284429|dbj|BABD01026259.1|2.0 TMP00679;, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst NQDSWQKWNAEYEFRYQLMHGLISLRAALGMDYCDSRAADYHHTHCNLYAVVNAQAAYKCMALTFNLRTHRPTLYGETLALGEDLHDIALTYFKKRFSLTLAMNNPFMDNYRIGCENWNRRAGNTSYQYVNETSRMLLVKVTYGMDFGRKRKTAAKRIQNEDTDTGILKGNKLast
1 -6.350sp|Q9NVX0|HAUS2_HUMAN HAUS augmin-like complex subunit 2 OS=Homo sapiens GN=HAUS2 PE=1 SV=1  ali   12  42...........................................................................................................................................SCFVNFTRLQQITNIQAEIYQKNLEIELLKLEK 74
2 -5.610sp|Q9H799|CE042_HUMAN Uncharacterized protein C5orf42 OS=Homo sapiens GN=C5orf42 PE=2 SV=3  ali   10  111......................................................................................................................................QLIPLENLIAFKQSQQKLTHNLFEQGDAGHLQLLKVK. 147
3 -5.550tr|E9PH94|E9PH94_HUMAN Uncharacterized protein OS=Homo sapiens GN=C5orf42 PE=4 SV=1  ali   10  110......................................................................................................................................QLIPLENLIAFKQSQQKLTHNLFEQGDAGHLQLLKVK. 146
4 -5.340sp|Q9H501|ESF1_HUMAN ESF1 homolog OS=Homo sapiens GN=ESF1 PE=1 SV=1  ali   8....................................................RLKYYYAVVDCDSPETASKIYEDCDGLEFESSCSFIDLRFIPDDITF---------DDEPKDVASEVNLTAYKPKYFTSAAMGTSTVEITWDETDHERITMLNRKFKKEELLDMDFQA.. 116
5 -4.990sp|Q4G0P3|HYDIN_HUMAN Hydrocephalus-inducing protein homolog OS=Homo sapiens GN=HYDIN PE=1 SV=3  ali   10  16.................................................................................................SIIIPFKNVFYHMVTFSIIVDNPAFTIRAGESVR-PKKINNITVSFEGNPSGSKTPITTKL.............. 75
6 -4.850sp|Q8IU81|I2BP1_HUMAN Interferon regulatory factor 2-binding protein 1 OS=Homo sapiens GN=IRF2BP1 PE=1 SV=1  ali   10  4..............................................................................................REQLLALSACAPFNVRFKKDHGLVGRVFAFDATARPPGYEFELKLFTEYPCGSGNVYAGVLAVARQREPGKALASSG. 86
7 -4.710sp|Q5T011|SZT2_HUMAN Protein SZT2 OS=Homo sapiens GN=SZT2 PE=2 SV=3  ali   12  4......................................................................................AIETTMNEIRWLLEDEMVGALRRGGIPQSPALHRAAAHIHSSPGRSTCLRQTLPLSFVFGPERSLTQFKEEFRRLHLPGHVLL... 86
8 -4.670tr|B4DMX0|B4DMX0_HUMAN Uncharacterized protein OS=Homo sapiens GN=KDSR PE=2 SV=1  ali   10  4......................................................................TRLISETTSVCKPEQVAIVKDAIQGNFNSSLGSDGYMLSALTCGMAPVTSITEGLQQVVTMGLFRTIALFYLGSFDS-RRCMMQREKSENADKTA....... 101
9 -4.670sp|Q9BX84|TRPM6_HUMAN Transient receptor potential cation channel subfamily M member 6 OS=Homo sapiens GN=TRPM6 PE=1 SV=2  ali   27  116............................................................................................................................................VNWAF--------------SEGDETGVFSIKK 133
10 -4.360tr|E9PHJ3|E9PHJ3_HUMAN Uncharacterized protein OS=Homo sapiens GN=FOSB PE=4 SV=1  ali   85.......................................................................................................................................SYTSSFVLTCPEVSAFAGAQRTSGSDQPSDPLNS... 118

FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 6 1 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.