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Query: HGC00921 gi|162841401|dbj|BABA01003308.1|3.0 TMP01242;, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPYRLLPNTDQARIRALKTAVVKGDMCDVYDLPVSLKTLGEARIFLSKFETAHSYYVHCYGEQSRNSKKHQANVKTARLYISHFIQVLNLAVIRMEIKESHKALYGLPVDNFSVPDLSSEASLAEWGQKIIEGERKRTSQGGIPIYNPTIAKVKVHYDIFMEGYEKQKSLQSLTNRSLEQLASMRVQADRLILDIWNQVEAKFQDVSPNEKRLEKCRDYGLIIIIGPEKNRIRRFFKICLSIHIPIFFWKSLQKITFRYGTCPCCRCDAYLYALast
1 -7.950sp|Q9HBG6|IF122_HUMAN Intraflagellar transport protein 122 homolog OS=Homo sapiens GN=IFT122 PE=1 SV=2  ali   21  3...................................................................................................................................................................................................FEQGGSEFVPVVVSRLVLRSMSRRDVLIKRWPPPLRWQYFRSLLPDASI-MFHSEDYELLVLQHGCCPYCR....... 80
2 -6.190sp|Q9UMZ2|SYNRG_HUMAN Synergin gamma OS=Homo sapiens GN=SYNRG PE=1 SV=2  ali   13  1...................................................................................................................................................PALPVIRDKYKDLTGEVEENERYAYEWQRCLGSALNVIKKANDTLNGISSSCTEVIQSAQGMEYLLGVVEVYRVTKRVELGIKATAVCSEKLQQLLKDI-VWNNLIGFM----ACGVCLLNV.... 150
3 -5.610sp|Q3KNT9|TMM95_HUMAN Transmembrane protein 95 OS=Homo sapiens GN=TMEM95 PE=2 SV=1  ali   19  8........................................................................................................................................................................................AHDLSGRLARLCSQMEARQKECGASPDFSAFALDEVSMNKVTEKTHRVLRVMEIKEAVSSLPSYWSWLRKTKLREALCPACRGSTTLY. 100
4 -5.460sp|Q9UKN1|MUC12_HUMAN Mucin-12 OS=Homo sapiens GN=MUC12 PE=1 SV=2  ali   13  17.......................................................................................................................................................................................................SSVTPGFDFQEQCTQKAAEGYTQFYYVDVLDGKLACVNKCTK--------GTKSQMNCNLGTCPRCLCNTHWYW 91
5 -5.340sp|Q9NVH2|INT7_HUMAN Integrator complex subunit 7 OS=Homo sapiens GN=INTS7 PE=1 SV=1  ali   11  10.............LNSLKEFSHAEQCLTGLQEENYSSALSCIAESLKFYHKGIASLTAA--STPLNPLSFQCEFVKLRI-FSQLICTCNSLKTSPPPAIATTIAMTLGNDLQRCGRISNQMKQSMEEFRSLASRYGDLYQASFDADSATLRNVELQISHAIEALILDPESASFQEYGSTGTAHADSEYERRMMSVYNHVLEEVESLNRKYTPVSYMHTACLCNAIIA----------LKVPLSFQRYFFQKLQSTSIKLALSP.......... 258
6 -5.290sp|Q7Z5M5|TMC3_HUMAN Transmembrane channel-like protein 3 OS=Homo sapiens GN=TMC3 PE=1 SV=3  ali   11  1...........................................................................................................................................................................QNIQFQKDLMANIRCRPWTM------GQKLRALRQAKNIVLKFEGRLTRTRGYQAAGAELWRKFARLACNFVVIFIPWERIKKIESHFGS............ 85
7 -5.290sp|Q5TCS8|AKD1_HUMAN Adenylate kinase domain-containing protein 1 OS=Homo sapiens GN=AKD1 PE=1 SV=2  ali   15  30...................................................................................................................................................PEMEPFKEKIGSFIILWKQLEATISEAYIKILNLEIADRTPQELLQKVVETMEKPFQ..................................................................... 86
8 -5.170sp|Q02505|MUC3A_HUMAN Mucin-3A OS=Homo sapiens GN=MUC3A PE=2 SV=2  ali   16  4.......................................................................................................................................................................................................NNSKTELTPEAICRRAAPTGYEEFYFPLVEATRLRCVTKCTS--------GVDNAIDCHQGQCPACRCDTHWF. 77
9 -5.160sp|P23378|GCSP_HUMAN Glycine dehydrogenase [decarboxylating], mitochondrial OS=Homo sapiens GN=GLDC PE=1 SV=2  ali   34  22.......................................................................................................................................................................................................................................................FWPTIARIDDIYGVCTCPPMEVY... 48
10 -5.090sp|Q49AR2|CE022_HUMAN UPF0489 protein C5orf22 OS=Homo sapiens GN=C5orf22 PE=1 SV=2  ali   10  5.PFKEM---TQEEYKILQELYQFKKPGTNLTEEDLVDIVDTRIHQLEDLEATFADLCDGDDEETVQRWASNPGMESLVPLVQ------SLKKRMEVPDYEMVHQAGLTCDYSELPHHISTEQ--------IECLIQSVHYLLKNLPNPTLVTIRSSLDDYCPS---------------DQVDTIQEKVLNMLRALYGNLDLQVYAAESPPS.............................................................. 185

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 5 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.