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Query: HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MQVDTKLINLKLWGYITMKKMIAYCGLDCEKCDAYIATINDNQELRKKTAKLWAELNNAPILPEHINCQGCRVDGIKTVFCDNMCGIRQCALEKGVATCGDCLDLERCPTVGEILENNPSALKNLKGLast
1 -7.480sp|O95497|VNN1_HUMAN Pantetheinase OS=Homo sapiens GN=VNN1 PE=1 SV=2  ali   12  3FKGTVFFDEFTFVKLTGVAGNYTVCKDLC--CHLSYKMSENIPNEVYALGA-----------------DGLHTVEGRYY---QICTLLKC-KTTNLNTCGD.......................... 83
2 -7.060sp|Q3V5L5|MGT5B_HUMAN Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B OS=Homo sapiens GN=MGAT5B PE=2 SV=2  ali   18  449....PPAHALRAWLAVPGRACTDTCGLICEPSFFPFLNSQDAFLKLQVPCDSTESEMNHLYPAFAQPGQECYLQKEPL-----SCA-RLCFRKGQVALCQGC......................... 556
3 -6.750sp|Q09328|MGT5A_HUMAN Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A OS=Homo sapiens GN=MGAT5 PE=1 SV=1  ali   18  185....PPLSALQVKLAEPGQSCKQVCQLICEPSFFQHLNKDKDMLKYKVTCQSSELAKDILVPSFDPKNKHCVFQGDLL-----SCA-RVCFIKGQVALCKDC......................... 292
4 -6.420sp|Q7Z2T5|TRM1L_HUMAN TRMT1-like protein OS=Homo sapiens GN=TRMT1L PE=1 SV=2  ali   13  4..........................QACPLCPKEKFRACNSHKLRRHLQNLHWKVS---VEFEGYRMCICHLPCRPVKPNIIGEQITS--KMGAHYHCIICSA....................... 76
5 -5.900sp|O95498|VNN2_HUMAN Vascular non-inflammatory molecule 2 OS=Homo sapiens GN=VNN2 PE=1 SV=3  ali   12  4......RDGFNFTELFENAGNLTVCKELC--CHLSYRMLQKEENEVYVLGA-----------------TGLHGRRRREY---QVCTLLKC-KTTNLTTCGR.......................... 78
6 -5.870sp|O43593|HAIR_HUMAN Protein hairless OS=Homo sapiens GN=HR PE=1 SV=5  ali   12  19......................................RREREALAWAQREGQGPAVTEDSPGIPRCCSRCHHGLFNTHWRCPRC---------SHRLCVAC......................... 73
7 -5.860sp|Q9P2D8|UNC79_HUMAN Protein unc-79 homolog OS=Homo sapiens GN=UNC79 PE=2 SV=3  ali   30  6....................................................................................CFSAGCCGRHGVRYCKRCHS....................... 28
8 -5.630sp|Q6L9T8|FA72D_HUMAN Protein FAM72D OS=Homo sapiens GN=FAM72D PE=2 SV=1  ali   12  16..........................LCCKFCKQVLSSRGMKAVLLADFSTDIPPTNAVDFTGRCYFTKIC------------KCKLKDCGNIVGYH-CSSCLLSCNNRHFWMFHSQAVYDINRLDS 117
9 -5.620sp|Q9NY84|VNN3_HUMAN Vascular non-inflammatory molecule 3 OS=Homo sapiens GN=VNN3 PE=2 SV=2  ali   12  3......FDEFTFTKLKRNTGNYTACKDLC--CHLTYKMSEKRTDEIYALGA-----------------DGLHTVEGQYY---QICALLKC-QTTDLETCGE.......................... 77
10 -5.600sp|A6NDK8|FA35B_HUMAN Protein FAM35B OS=Homo sapiens GN=FAM35B PE=3 SV=3  ali   18  139.........................................LTAAQKISLNAHSSLKSIFSSLPNIIYTGC-----------AKCGLELETDENRIKQCFSCLPFTMKKIY................ 198
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Sequence clustering strategies improve remote homology recognitions while reducing search times. Protein Eng. 2002 Aug;15(8):643-9.