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Query: PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217], from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNTETLTYLLEHPDKITSEETTQLRTVVEEFPFFQAARALHLKGLKNEDSFLYNTYLKKTAAHTQDRTVLFDFITSEIFNQTAISAQIKAQEDHLRNMPVHEFVDVSSEMEAEELQKANRVLDPEFFVRKEASEETQPEEQLQLGKPLDFNKAETHSFSEWLKLTAFNKIDRSKEVKETISASASDKTEASSENTIIEETASETPLELETTIPSIEVDQDPERARRLELIDKFIESNPKIKVSTPDSNFKKPNLEDRFQPSDSLMTETLARVYVEQKNFSKAKQAYRILSLKYPEKSGFFADQIRAIEKLQENLast
1 -6.770tr|F8WDN4|F8WDN4_HUMAN Uncharacterized protein OS=Homo sapiens GN=TTC21A PE=4 SV=1  ali   18  1..................................................................................................................................................................................................................................................................MSSNDSSLMAGIIYYSQEKYFHHVQQAAAVGLEKFSNDPVLIQDAISDLESIRHH 68
2 -6.080sp|Q149N8|SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH OS=Homo sapiens GN=SHPRH PE=1 SV=2  ali   17  4..........................................................................................................................................................................................................................................................................NGLAGIHIIKGEYALAAELYRELRSSEEHKGKLKTDSLQRLHATHN. 50
3 -6.010sp|Q96SY0|CO044_HUMAN UPF0464 protein C15orf44 OS=Homo sapiens GN=C15orf44 PE=1 SV=2  ali   30  8...................................................................................................................................................................................................................................................................................QTDVQKILRNARKL----PEKTQTFYKELNRLRK.... 37
4 -6.010sp|Q68DN6|RGPD1_HUMAN RANBP2-like and GRIP domain-containing protein 1/2 OS=Homo sapiens GN=RGPD1 PE=1 SV=2  ali   13  315.............................................................................................................................................................................................................................................................VDIQASEIVEYEEDAFAILDAVHGNIEDAVTAFESI--KSVVSYWNLALIFHRKAEDIEN 375
5 -5.690sp|Q8TF17|S3TC2_HUMAN SH3 domain and tetratricopeptide repeats-containing protein 2 OS=Homo sapiens GN=SH3TC2 PE=1 SV=2  ali   10  15....................................................................................................................................................................................................................................................KHELDVVAYVLRQGIVVGSSPLEAAIRLLLSLGRHEEVLPFAERLAVASVQQHG-MSLPIWQVHLVLQN 122
6 -5.490tr|F8W9Q8|F8W9Q8_HUMAN Uncharacterized protein OS=Homo sapiens GN=ADCK1 PE=4 SV=1  ali   59..............................................................................................................................................................................................................................................SVPYGSEEYLQLRSKVHLRSARRLCELCCANRGTFIKVGQH---LGALDYLL---PEE---YTSTLKVLHSQA.. 122
7 -5.270sp|Q86TW2|ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 OS=Homo sapiens GN=ADCK1 PE=1 SV=2  ali   59..............................................................................................................................................................................................................................................SVPYGSEEYLQLRSKSWPVFLQVHLRSARRLCELCCANR-----IKVGQHLGALLPEE---YTSTLKVLHSQA.. 129
8 -5.250tr|C9JGX6|C9JGX6_HUMAN Uncharacterized protein OS=Homo sapiens GN=DENND3 PE=4 SV=1  ali   12  30..........................VVSRFPYYNSLKRRKQLTTVPFCVIMLENEPRQIAELVL........................................................................................................................................................................................................................................................ 74
9 -5.040sp|P55197|AF10_HUMAN Protein AF-10 OS=Homo sapiens GN=MLLT10 PE=1 SV=1  ali   79............................................................................................................................................................................................................................................................ATLTNSASGLGLLSDQQRQILIHQQQFQQLLNSQQ------PVHRHPHFTQLPPTHFSPS. 134
10 -4.970sp|Q14674|ESPL1_HUMAN Separin OS=Homo sapiens GN=ESPL1 PE=1 SV=3  ali   61..........................................................................................................................................................................................................................................................................QILAALYQLVAKPMQALEVLLLRIVCPSYAQLHLEEAASSLKH.... 129

FFAS is supported by the NIH grant R01-GM087218-01
1 3 7 8 0 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sasin JM, Godzik A, Bujnicki JM. SURF'S UP! - protein classification by surface comparisons. J Biosci. 2007 Jan;32(1):97-100.