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Query: PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTDSLFWAIDIKNQFHHNWMGMSQINQTTSGNFYSHRNITDQVLENFTDALDCLTAHLMLECSEVLAGVKPANLISIVNRTRPCGRNLYLLWQQHHTDLAQRLNNLNFMVLQSRQQSLLLLCYDHVRLEHHLSHPGIRTLLHKAGYKDDADCEGMLLELRSRIGGNNSFPHEIGLFIGYPAKDVAAFMGLVRLPFTCQRLWKIYGNPARSLALAEQYRCCRNKMGAILARGTSKTLEIDRSDHPFFCQTDENDYQYLPLast
1 -7.000sp|Q96LT6|CA074_HUMAN UPF0739 protein C1orf74 OS=Homo sapiens GN=C1orf74 PE=2 SV=1  ali   16  39.........................................................LAGEVLAVARGLKPAVLYDCNCAGASELQSYLEE---------LKGLGFLTFGLHILEIGENSLIVSPEHVCQHLEQVLLGTIASVCSLDQLQDLKALVAEIITHLQGLQRDLSLAGILLGYPV............................................................................. 181
2 -5.650sp|Q9H2L5|RASF4_HUMAN Ras association domain-containing protein 4 OS=Homo sapiens GN=RASSF4 PE=1 SV=2  ali   16  2...................................................................................................................................................................DLGVEVPHEVAQYIKFEMPVLDSFVEKLKEE-----------EEREIIKLTMKFQALRLTMLQRLEQ............................ 57
3 -5.620sp|Q6ZS30|NBEL1_HUMAN Neurobeachin-like protein 1 OS=Homo sapiens GN=NBEAL1 PE=2 SV=3  ali   10  9FCESLYWRHRISGRI-LSTVEKSRQKYKPASLTVEFVPFFYQCFQESEHLKESLKCCLLHLFGAIVAGGQRNALQAISPATMEVLMRVLADCDSWEDGDPEEVGRKAELTLKCLTEVVHILLSSNSDQRQVETSTILENYFK.................................................................................................................... 154
4 -5.440tr|B5MEH5|B5MEH5_HUMAN Uncharacterized protein OS=Homo sapiens GN=IZUMO2 PE=4 SV=1  ali   7  39.........GMEGPFFRDYALNVFVGKVETNQLDLVASFVKNQTQHLMGNSLKDEPLL-------------EELVTLRANVIKEFKKVLISYELKAC----------------NPKLCRELAKRRGVGLFTLPEDHSQV------YPQKVLLCRPATPRGPAVPDGQQIPEEPGA-VGHPHFCVSGYIQTKPKTPAAVGRW--FGGKEKGK............................................... 214
5 -5.330sp|Q5T5J6|SWT1_HUMAN Transcriptional protein SWT1 OS=Homo sapiens GN=SWT1 PE=2 SV=1  ali   13  1......WSI-----LESVWITIYQNSTDVFQRLGSNSALTTSNIASFEEAFICLQKLM-----AAVRDILEGQRILAPNSNYQDVETLYNFLIKYEVNKNVK--------------------FTAQEIYDCVSQTEYREKLTI-GCRQLVEMEYTMQQCNASVYMEAKNRGWCEDMLNYRI............................................................................. 145
6 -5.260sp|C9J302|CD051_HUMAN Uncharacterized protein C4orf51 OS=Homo sapiens GN=C4orf51 PE=4 SV=1  ali   15  1...................................................................................................................................LTNSSACHLLCWAGTQETTDIKGLFPDITRPFKKSFDVKHGVA-------HQIWDFGDCFPTP---PNYGKYCVRPKKAQEALINYSRRGKGVLKHLHG............................ 90
7 -5.130sp|Q8IYA6|CKP2L_HUMAN Cytoskeleton-associated protein 2-like OS=Homo sapiens GN=CKAP2L PE=1 SV=4  ali   10  4......................................................................................................................................................KINNTLTECLNLIEG------------GVPSNEILNILSSIPEAEKFAKFWICKAKLLASKGTFDVIGLYEEAIKNGATPIQELRKVVLN.................. 81
8 -5.070sp|Q86UW7|CAPS2_HUMAN Calcium-dependent secretion activator 2 OS=Homo sapiens GN=CADPS2 PE=1 SV=2  ali   10  4.SEDLFWKLDALQMFDLHWPEQEFAHHLEQRLKLMASDMLEACVKRTRTAFELKLQKASKTTDLRI----PASVCTMFNVLVDAKKQSTKLCALDGGQEQQYHSKIDDLIDNSVKEIISLLVSKFVSVLEGVLSKLSR-------YDEGTFFSSILSFTVKAAAKYVDVPKDLA-FVRQNQDILREKVNEEMYIEKLFDQW--YSSTDRLDLQLHIYQKTLIKIVKKTYRDFRLQGVLEGTLNSKTYDTVHRRLTV.. 264
9 -5.060sp|Q9UPY3|DICER_HUMAN Endoribonuclease Dicer OS=Homo sapiens GN=DICER1 PE=1 SV=3  ali   14  7............................................................................................................................PECLRDSYPRPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFMLSLQMLELITRLHQYIFSHILR-------LEKPALEFKPTDADSAYCVLP 133
10 -5.050sp|P50749|RASF2_HUMAN Ras association domain-containing protein 2 OS=Homo sapiens GN=RASSF2 PE=1 SV=1  ali   10  1....................................................................................................................................................................QVEEVTYDVAQYIKFEMPVLKSFIQKLQEE-----------EDREVKKLMRKYTVLRLMIRQRLEE............................ 55
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Lukasz Jaroszewski, Zhanwen Li, S. Sri Krishna, Constantina Bakolitsa, John Wooley, Ashley M. Deacon, Ian A. Wilson, Adam Godzik, Exploration of Uncharted Regions of the Protein Universe. Plos Biology. 2009 Sep. 7(9):e1000205