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Query: PB006101 JCVI_PEP_1096697844517 /source_dna_id=JCVI_ORF_1096697844516 /offset=0 /translation_table=11 /length=371 /full_length=371, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst YLISFSFLLYSCDEKPKSGITNPSFLPNASGENNEMLIVMDSTKFKGKIGRELVDIYSSYISGLPQPEPRYDLRYIKPRKFNSILKHAKNIVVAFSLEGNSLDSEILRRNFNSESLDKIQSDSSLFYFVRRNQYARGQVVLYLFSENDDDLYSKIKRNRNSILKFFDDELKKRVDTEIFRKVENNLMDKIFTDHNIKIKIPYGYDLAKSINEENSNFFWLRQLDLEYDKNIFLYYEDYSNSELKNFYDVFNSSDINIKPIRAYISKKYLRDSEKSKIFMDIQDVFPIQSNKINFKGNLAIESRGLWKLSDISAGGPFLSKIIYDSKLKRVYYLEGYVYAPGLKKRGLMQEISSILMTFELast
1 -4.380sp|Q96K78|GP128_HUMAN Probable G-protein coupled receptor 128 OS=Homo sapiens GN=GPR128 PE=1 SV=2  ali   17..........FCRNGGTWENGRCICTEEWKGLRCTIANFCENSTYMG........................................................................................................................................................................................................................................................................................................................ 53
2 -4.220sp|Q8ND61|CC020_HUMAN Uncharacterized protein C3orf20 OS=Homo sapiens GN=C3orf20 PE=1 SV=2  ali   14  29.......................................................................KAPLVSDVELERFLLPSQVLVFGIISSQNYTSTGQLQWLLNTLYNHQQRGRGSPCIQCRYDSYRLLQYDLDSPLQEDPPLMVKKNSVVQGMILMFAGGKLIFGGRVLYGLSKQNLLKQIQQDYKMGYFLPDDYKFSVPN..................................................................................................................................................... 176
3 -4.080sp|Q7Z7G8|VP13B_HUMAN Vacuolar protein sorting-associated protein 13B OS=Homo sapiens GN=VPS13B PE=1 SV=2  ali   6...........................................................................................................................................................................................QYVQDAESLKLPGVYEVLFYNETEDCPGMMLW-RYPEPRVLTLVRITPVPFNTTEDPDISTADLGDVLQVLEYWDELQKVFVA----REFNLSESKVCELQLPDINLVNDQKKLVSSLWRI................................................... 126
4 -3.960sp|Q8NDB2|BANK1_HUMAN B-cell scaffold protein with ankyrin repeats OS=Homo sapiens GN=BANK1 PE=1 SV=3  ali   10  1..................................DIIMIYDAEEWALYLTEVFLHVVKR------EAILLYRLENFSFRHLELLNLTSYKCKLL---------------ILSNSLLRDLTPKKCQFL--EKILHSPKSVVTLLCGVKSSDQLYELLNISQSRWEISTEQEPEDYISVIQSIIFKDSEDY-------EVNIP.............................................................................................................................................................. 140
5 -3.950sp|Q68DK2|ZFY26_HUMAN Zinc finger FYVE domain-containing protein 26 OS=Homo sapiens GN=ZFYVE26 PE=1 SV=3  ali   22.............................................KEEENELVRSEFYEQAPSASLCIAILNLHRDSIACGHQLIEHCCRLGLTNPEVDAGLLTDIMKQLLFSAKMMFVKAGQSQDLALCDSYISKVDVLNILVAAAYRHVPS--------LDQILQPAAVTRLRNQLLEAEYYQLGVEVSTKTGLD.................................................................................................................................................................. 168
6 -3.800sp|Q5VVC0|CA146_HUMAN Uncharacterized protein C1orf146 OS=Homo sapiens GN=C1orf146 PE=2 SV=1  ali   11  15.....................................IIISSSLKSYEVATALSDSVENGSIIFSLSGVAFLLMDTKEAKIEKFINIHQNSFLV-----------LSAALHGPEEWKLMFRIQQRFL---------GCNLRILPVHNTVNAINLMCTIAKTTSKPYIDSICYRMITAKAYIIEQSPVWKTLQKIKLN.................................................................................................................................................................. 173
7 -3.740sp|Q96GC6|ZN274_HUMAN Neurotrophin receptor-interacting factor homolog OS=Homo sapiens GN=ZNF274 PE=1 SV=2  ali   10  7.......................................VERGIPQDTIPEYPELQLDPKLDPLPAESPLMNIEVVEVLTLNQEVAGPRNAQIQALYAEDGSLS............................................................................................................................................................................................................................................................... 71
8 -3.590sp|Q14573|ITPR3_HUMAN Inositol 1,4,5-trisphosphate receptor type 3 OS=Homo sapiens GN=ITPR3 PE=1 SV=2  ali   11  1YHISLVDLLAACAEGKNVYTEI---KCTSLLPLEDVVSVVTHEDCITEVKMAYVNFVEVEMKEIYTSNHIWTLFENFTLDMARVCSKREK----------RVADPTLEKYVLSVVLDTINAFFSSPFSENSTSLQTHQTIVVQLLQSTTRLLECPWLQQQHKGSVEA-RTLAMVAKGRAILLPMDLDAHISSMLS.................................................................................................................................................................... 190
9 -3.520sp|Q14571|ITPR2_HUMAN Inositol 1,4,5-trisphosphate receptor type 2 OS=Homo sapiens GN=ITPR2 PE=1 SV=2  ali   10  1YHITLVELLAACTEGKNVYTEI---KCNSLLPLDDIVRVVTHDDCIPEVKIAYVNFVNHCYVDTEVEMKEIYTSNHIWKLFENFLVDMARV--CNTTTDRKHADIFLEKCVTESIMNIVSGFFNSPFSDNSTSLQTHQPVFIQLLQSAFRIYNCTWPNPAQKASV---ESCIRTLAEVAKNRGIAIPVDLDSQV..................................................................................................................................................................... 186
10 -3.500sp|Q9H2M9|RBGPR_HUMAN Rab3 GTPase-activating protein non-catalytic subunit OS=Homo sapiens GN=RAB3GAP2 PE=1 SV=1  ali   17............................VIAREQKAVFL--VPKWKYSDKGKEEMQFAVGWSGSLNVEEGECVTSALCIPLASQKRSSTGCIVVGFTSGTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILIVTIDGFSLFQSLRACRNQVAKAAASGNENIQPPPLYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLLSHVALAVASKLTS............................................................................................. 267

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.