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Query: PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7], from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst ASYISVPRDLTKVKSKVMFNLTKRQLICFGMAVLIGVPSFFLMKTVMKTNTAVMGMMVIMMPFFFLAMYEKNGQPLEVILEHMIQAIFQRPKIRPYVTDNYYAALLRQAKAEKEVEEIVRLSQKEKSGEKNIHNAGGVKQSRPDGSKGNRKKRPLast
1 -7.110tr|B3KSI8|B3KSI8_HUMAN Uncharacterized protein OS=Homo sapiens GN=ATP9B PE=2 SV=1  ali   8  12...............ALGQFVMHRGLIISTM---VCHHIHHVPSVLLSAGPGREARDGDALPGAVQGPHQGKILVLQNLPHLGFNKYLPRRHPHVWGPGAL..................................................... 95
2 -6.420sp|Q4VNC0|AT135_HUMAN Probable cation-transporting ATPase 13A5 OS=Homo sapiens GN=ATP13A5 PE=2 SV=1  ali   13  41......PGSILSFETTTLWPITTINYITVAFIFSKG...................................................................................................................... 70
3 -6.110sp|Q4ADV7|RIC1_HUMAN Protein RIC1 homolog OS=Homo sapiens GN=KIAA1432 PE=1 SV=2  ali   9  1AENMYIDMMLWRHARRLLEDVRLKDLGCFAAQLGFELISWLCKERTRAARVDNFVIALKRL............................................................................................. 61
4 -5.670sp|Q9NUL5|CS066_HUMAN UPF0515 protein C19orf66 OS=Homo sapiens GN=C19orf66 PE=2 SV=2  ali   3  5..GVELEKSVRRLREKFHGKVSSKKAGALM............................................................................................................................ 32
5 -5.510sp|Q13127|REST_HUMAN RE1-silencing transcription factor OS=Homo sapiens GN=REST PE=1 SV=3  ali   22  21NIGMALPNDMYDLHDLSKAELAAPQLIMLANVALTG...................................................................................................................... 56
6 -5.380tr|A8MYD4|A8MYD4_HUMAN Uncharacterized protein OS=Homo sapiens GN=SSX4B PE=4 SV=1  ali   6  34.........................................................................................NHRNQVERPQMTFGSLQRIFPKDPKGGNMPGPTDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP 98
7 -5.170sp|Q8IW35|CEP97_HUMAN Centrosomal protein of 97 kDa OS=Homo sapiens GN=CEP97 PE=1 SV=1  ali   13  29.......EDIQTDEDKLNCSLLSSESTFMPVASGLS...................................................................................................................... 57
8 -4.830sp|A6NN90|CB081_HUMAN Uncharacterized protein C2orf81 OS=Homo sapiens GN=C2orf81 PE=2 SV=2  ali   12  1.VDI-VPGRLSEAEMALTALEEGEDVVGDILADLLARVMDSAFKVYLTQQCIPFTI.................................................................................................. 54
9 -4.700tr|F8WEE2|F8WEE2_HUMAN Uncharacterized protein OS=Homo sapiens GN=POLDIP3 PE=4 SV=1  ali   3  13...LKLTKTIQNLDDDGIASVPTKQMKFAASGGFL....................................................................................................................... 49
10 -4.650sp|Q9Y6X8|ZHX2_HUMAN Zinc fingers and homeoboxes protein 2 OS=Homo sapiens GN=ZHX2 PE=1 SV=1  ali   35  48..KVPVPLNTTKYNSALDTNAT.................................................................................................................................... 67
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.