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Query: PB011023 A7V2G7_BACUN/1-167 PB011023; Pfam-B_11023;, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .
# Score Template Links and tools%idFirst MNILNNKNKRTSIFKALALCLFAAVSFTFVSCDDDMDIQQSYPFTVETMPVPNKVTKGQTVEIRCELKKTGDFANTLYTIRYFQFEGEGTLKMDNGITFLPNDRYLLENEKFRLYYTAQGDEAHNFIVVVEDNFGNSYELEFDFNNRNVKDDGVITVVPIGNFKPLTLast
1 -8.450sp|Q8N3G9|TM130_HUMAN Transmembrane protein 130 OS=Homo sapiens GN=TMEM130 PE=2 SV=1  ali   9  1..................................ELNLTTDSP-----------ATTGAVVTISASLVAKDNLPADAHLYRFHWIHTPLVLTGKME-----------KGLSSTIRVVGHVPGEFPVSVWVTAADCITEFLVGDLVVTQNTSLPWPSSYLTKTVLKVS 129
2 -8.300sp|Q8TDX9|PK1L1_HUMAN Polycystic kidney disease protein 1-like 1 OS=Homo sapiens GN=PKD1L1 PE=2 SV=1  ali   5  132...........................................................VYMLKAVIYNEFHGTEVELGPYYVEIGHEAVSAFMNSSSVHEDEVLVFNQKSTVVIHHFPSIPSYNVSFISQTQVG-DSQAWHSMTVWYKMQSVSV............ 231
3 -8.270sp|Q96PW8|K1920_HUMAN Uncharacterized protein KIAA1920 OS=Homo sapiens GN=CSPG4P5 PE=5 SV=2  ali   14  3.........................................................................SPPTFHCEVVQAPRKGNFQLQGTMLSDGQGFTQDDVQAAEVTYGASVAVEDTFCFHVTAPPYFSPLCTFSIHIGGDPDMPVLTNV......... 91
4 -7.720sp|Q8TEQ8|PIGO_HUMAN GPI ethanolamine phosphate transferase 3 OS=Homo sapiens GN=PIGO PE=2 SV=3  ali   14  21...PPRHNGAYALRLGIGLLLCTRLAGLFHRCPEETPVCHSSPWLSPLASMVGGRAKN............................................................................................................. 75
5 -6.960tr|E7ESK3|E7ESK3_HUMAN Uncharacterized protein OS=Homo sapiens GN=MUC4 PE=4 SV=1  ali   13  64..............................SCIYDTLALRNASIGLHTREVSKNYTLNQYPPSINGGRVIEAYKGQTTLIQYTSNAEDANFTLRDSCT----------FENGTLLWTPKSLEPFTLEILARSAKIGLA............................. 170
6 -6.960tr|E9PDY6|E9PDY6_HUMAN Uncharacterized protein OS=Homo sapiens GN=MUC4 PE=4 SV=1  ali   13  64..............................SCIYDTLALRNASIGLHTREVSKNYTLNQYPPSINGGRVIEAYKGQTTLIQYTSNAEDANFTLRDSCT----------FENGTLLWTPKSLEPFTLEILARSAKIGLA............................. 170
7 -6.960sp|Q99102|MUC4_HUMAN Mucin-4 OS=Homo sapiens GN=MUC4 PE=1 SV=4  ali   13  64..............................SCIYDTLALRNASIGLHTREVSKNYTLNQYPPSINGGRVIEAYKGQTTLIQYTSNAEDANFTLRDSCT----------FENGTLLWTPKSLEPFTLEILARSAKIGLA............................. 170
8 -6.960tr|E7ENC5|E7ENC5_HUMAN Uncharacterized protein OS=Homo sapiens GN=MUC4 PE=4 SV=1  ali   13  64..............................SCIYDTLALRNASIGLHTREVSKNYTLNQYPPSINGGRVIEAYKGQTTLIQYTSNAEDANFTLRDSCT----------FENGTLLWTPKSLEPFTLEILARSAKIGLA............................. 170
9 -6.050sp|O14649|KCNK3_HUMAN Potassium channel subfamily K member 3 OS=Homo sapiens GN=KCNK3 PE=1 SV=1  ali   9  1...MKRQNVRTLALIVCTFTYLLVGAAVFDALESEPELIERQRLE.......................................................................................................................... 42
10 -5.560tr|F5GY20|F5GY20_HUMAN Uncharacterized protein OS=Homo sapiens GN=GPNMB PE=4 SV=1  ali   8  26..........................................RVQAVLTS-DSPALVGSNITFAVNLIPRCQKEDANGNIVYEKNCRNGQYFQKLGR----------CSVRVSVNTANVTLGPQLMEVTVYRRHGRAAQVKDVYVVTDQ.................. 126
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Rychlewski L, Ye Y, Jaroszewski L, Godzik A. Integrated web service for improving alignment quality based on segments comparison. BMC Bioinformatics. 2004 Jul 22;5(1):98.